Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03442 ATGGAAAAACAACCTGAATGTGCTATCATTAACATCCCAAACATAAAAACAGACCAACCAAAACCCCTTCAACATGTGTCGACCCCAAAGAAGAAGAACGGTGGCGTGCGTTTTCTTAGGGTTGCACTCTTCAAGATGCGAGGACAACATTCCGCAAAACCAAGCGTGATTCAGGTAGATGATGATGATGACGGGTCCAAGAGCATTTGGAGGAAGCTTGTGGGGTCCATGAGGCCATTGCACCTTCAAAGCAACCAATCTCCACGCTCATTTTCTCAACCCGACACCACCACTTTGTCATCACCTTCAGCAGATTGTGGCGGTTATGTTTCTGATTTTGTGGCGGAGGAGGAGCCTTATTCGCCTTCCCCACCTAGCAGCCGTTACGCTTCGGCTGTGGGGTTGAACGAACTCGTGCGAAATGATGAGGAAAATGAGAAGCAAGAGGTGATTGTGGAGGAGTGCGAAGAACACGTTAACGTTAACGTTGATGGAGATGGGGATGAGATGATTGATGCCAAGGCTGAGGATTTCATTGCTCAGTTCTACCAAGAAATGAGGTTGCAACGTTTGGATTCCGTGGATCGCCGTTACGTTGAGCGAAACCAAAGATCATTGGGCTTGTGA 627 0.4785 MEKQPECAIINIPNIKTDQPKPLQHVSTPKKKNGGVRFLRVALFKMRGQHSAKPSVIQVDDDDDGSKSIWRKLVGSMRPLHLQSNQSPRSFSQPDTTTLSSPSADCGGYVSDFVAEEEPYSPSPPSSRYASAVGLNELVRNDEENEKQEVIVEECEEHVNVNVDGDGDEMIDAKAEDFIAQFYQEMRLQRLDSVDRRYVERNQRSLGL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03442 208 MobiDBLite consensus disorder prediction 81 104 - -
Pumo5g03442 208 Pfam Cotton fibre expressed protein 168 201 IPR008480 -
Pumo5g03442 208 PANTHER COTTON FIBER PROTEIN 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03442 Pumo-Chr5 83681915 83682541 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03442 - - gmx:102662079 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03442 5 83681915 83682541 Pumo3g02201 3 33805360 33806001 PCT