Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02201 ATGGAGGTAAAGGGTGAAAACTCCATGAACACTAGCATTGACCAAAAAGCAATTACCCCTCATGAAGAACCCAATAATAATAACATCACTCGTTCTTCCCTCAACAAGAAGGGTAAGAGGTCCAAGAACTTCTTCAAGGTGGCGCTGTTCATGATGCGAGGGCGTTCTCGCAAATCCAAAATGCTCGCTGTGGATGACGAGTCCAAGAGCATATGGAGGAAGCTCGTGGGGTCCATGAGGCCATTGCACCTACAAAGCAACCAATCTCCATCTCATGATAATGATAATAATAACAATATTTCTCATCAGTCTAAAATGATGATGATTACCTCAGCGCCGTCTGAAAACGGCGATGAGGGGTTTGATTCTGCTTCCGAGTTTACAAACTCGCCGTCTCCGTCTAGTAGCCGTTACGCCTCGGCCGTTGGGCTAAACGAAATGGTGCAGGAGGAGGAGGACGACGAGAAGGAGAAGGAGAAGGAGGAGGAGAATAAGAATATTATTGATGGGGAGGGGGATGAGATGATTGATGCCAAGGCTGAGGAGTTCATTGCTCAATTTTACCAACAAATGAGGTTGCAGCGTTTGGATGTCATGGATCGTCATTACCAAGAGATAAGCATGAGGTCATTAGGTTTATGA 642 0.4579 MEVKGENSMNTSIDQKAITPHEEPNNNNITRSSLNKKGKRSKNFFKVALFMMRGRSRKSKMLAVDDESKSIWRKLVGSMRPLHLQSNQSPSHDNDNNNNISHQSKMMMITSAPSENGDEGFDSASEFTNSPSPSSSRYASAVGLNEMVQEEEDDEKEKEKEEENKNIIDGEGDEMIDAKAEEFIAQFYQQMRLQRLDVMDRHYQEISMRSLGL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02201 213 MobiDBLite consensus disorder prediction 111 142 - -
Pumo3g02201 213 Pfam Cotton fibre expressed protein 173 206 IPR008480 -
Pumo3g02201 213 MobiDBLite consensus disorder prediction 1 38 - -
Pumo3g02201 213 MobiDBLite consensus disorder prediction 111 173 - -
Pumo3g02201 213 Coils Coil 141 165 - -
Pumo3g02201 213 MobiDBLite consensus disorder prediction 1 34 - -
Pumo3g02201 213 MobiDBLite consensus disorder prediction 159 173 - -
Pumo3g02201 213 PANTHER COTTON FIBER PROTEIN 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02201 Pumo-Chr3 33805360 33806001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02201 - - gmx:100800206 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03442 5 83681915 83682541 Pumo3g02201 3 33805360 33806001 PCT