Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03405 ATGAAGATGAGGTGTTGGATCATATTTGTTGTTTGCATTGTGGCGTATGTGAATGTGGTAGTTGGAGAATTGTCAGCGTACGACGTTCTTGAGAAATACGATCTCCCAGTGGGTCTTCTTCCGAAGGGTGCGACAGGGTATGAGCTAAACGAAAAAAACGGGCACTTCACAGCGTATTTGAATGGAACATGCTACTTCAGCATAAAGTCTTATGAGTTAAAGTACAAGTCCACCATCAAGGGAGTGATCTCCAAGGGCAAGTTGTCAAAGCTGAAAGGCGTTAGTGTGAAGATTGAAGTGTTGTGGCTCAGAATCGTGGAAGTCACTCGCGACGGCGATGACATACAATTCTCTGCGGGTGTTGCCAAAGCTGGCTTCAGCGTCGACAGCTTCTCGGAGAGCCCTCACTGTGGATGTGGATTCGATTGCAACAGTAACAATTCCAATCAAAACGGTCATGTTTCTTCTCTTTAA 474 0.4557 MKMRCWIIFVVCIVAYVNVVVGELSAYDVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTCYFSIKSYELKYKSTIKGVISKGKLSKLKGVSVKIEVLWLRIVEVTRDGDDIQFSAGVAKAGFSVDSFSESPHCGCGFDCNSNNSNQNGHVSSL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03405 157 SUPERFAMILY At5g01610-like 12 143 IPR036758 -
Pumo5g03405 157 PANTHER T31J12.3 PROTEIN-RELATED 24 137 IPR007493 -
Pumo5g03405 157 Pfam Protein of unknown function, DUF538 26 131 IPR007493 -
Pumo5g03405 157 Gene3D - 16 136 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03405 Pumo-Chr5 83156987 83157766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03405 - - gmx:100500136 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03405 5 83156987 83157766 Pumo5g03405 5 83156987 83157766 ECH
Pumo5g03405 5 83156987 83157766 Pumo3g02228 3 34130917 34131788 ECH
Pumo5g03405 5 83156987 83157766 Pumo3g02228 3 34130917 34131788 PCT