Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02228 ATGATGTCTTCAATTAGATTCCTGTGGATCCTGGTGGTGTCTTTGACAGCATCATGCGCCTTAAGCCAACCGCAGAAGCTATCAGCGTACGATGTTCTCATGGAGTACGGCTTCCCGGTGGGTCTTCTACCCAAAGGAGCCATAGGCTATTCGCTCAACAGAGAAACCGGCGAGTTCGCAGTGTATTTCGAAGGAGCCTGCAGCTTCGACATAGAGTCCTACGCGCTCAAGTACAAGTCCACCATCACGGGAGTGATCTCCAAGGGCAGGCTCTACAATCTTAAAGGTGTGACCGTCAAGATCCTCCTCTTGTGGCTCAACATCGTCGAGGTCACTCTTCAGGGCAACGATATATACTTCTCTGTGGGCATCGCTTCCGCTGATTTCGGAGTTGAGAACTTCCTCGAGAGCCCCCAGTGTGGATGTGGCTTCGATTGCAAAACGCTCCCCCTAAACGGTGACGTTTCCTCAATTTAA 477 0.5115 MMSSIRFLWILVVSLTASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRETGEFAVYFEGACSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVTLQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDVSSI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02228 158 PANTHER T31J12.3 PROTEIN-RELATED 15 141 IPR007493 -
Pumo3g02228 158 Pfam Protein of unknown function, DUF538 29 134 IPR007493 -
Pumo3g02228 158 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pumo3g02228 158 SUPERFAMILY At5g01610-like 7 146 IPR036758 -
Pumo3g02228 158 Gene3D - 14 137 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02228 Pumo-Chr3 34130917 34131788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02228 - - gmx:100500410 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02228 3 34130917 34131788 Pumo3g02228 3 34130917 34131788 ECH
Pumo5g03405 5 83156987 83157766 Pumo3g02228 3 34130917 34131788 ECH
Pumo5g03405 5 83156987 83157766 Pumo3g02228 3 34130917 34131788 PCT