Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03343 ATGCTTCTGCAATCTTTGTTAGGGGGTCATGGTTCTTTATTGTTGTTTTTTTGTGTTTTTCTTTTTTCCATACACAGGCTCTTGAGGACAACCAAGAGAAGAAGAGTGAAGAAGGAGAAGATGGCTGGAATAACGAAGAATCAACCGTCACAGTGGTGGTGGCTTGATAGCCAAACCACTACTAATCGATCCCCTTGGCTTCAATCAACTCTCTCTGAGCTAAATGAGAAGACAAGGGCAATGTTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCCAAACGTGCAGAGATGTATTACAAGAAGCGACCAGAGCTTGTGAGCATGGTTGAGGATTTCTACAGGACACACCGCTCCCTAGCTGAGCGCTATGATCAAGTCAAACCTGATACTACTGGAATTGGACACCTTATTTCTGGGGGGTCTCCTTTTGCTTCAGCCAAGTATCAGTTAGAGAAGTTGACGACTTTTTCAGATAATGGATATGATACCTATTCTGAGCATTGTGATGTGTACGAGTCTGAGGAATCTGAAGTTGATGATCCTGAACAGGAGGAGGAGGAAGAGGGGACCAAGTTTCTTCATAACTGCACAAAAAGGGAGCAAGTTTCATTTGTGACTGTGAGTGATGATGAAGTGATGAAGCTGAGGGGTGAAGTTAAGAGACTCAATGAAGAGAACAAGGCTCATAGGGATCAAATCAAGCAGAAGGATATCGTTTGTGATGAAGTGATGAAGTTGAGGGAAGAAATTGGAAGGCTTAGAGATGAGAATGAGGCACAGAAGGAACAACTCAAGCAGAAGGATGAAGAGAAGATTGAGGTGATAAGACAGCTGAGTTTAGCAATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAACTACATTGCTAAGGAGTCCACCAAGAAATGGAAGAACCCATTTGAGATCAACAAACTTGTGGGAGCATTTTCTGTGAAGTTGTTCAATGGTACTCCAAAGAATCAGCCCGGCGTTGAGCTCTCTAGATGTGGTTAA 1020 0.4255 MLLQSLLGGHGSLLLFFCVFLFSIHRLLRTTKRRRVKKEKMAGITKNQPSQWWWLDSQTTTNRSPWLQSTLSELNEKTRAMLKLIEEDADSFAKRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQVKPDTTGIGHLISGGSPFASAKYQLEKLTTFSDNGYDTYSEHCDVYESEESEVDDPEQEEEEEGTKFLHNCTKREQVSFVTVSDDEVMKLRGEVKRLNEENKAHRDQIKQKDIVCDEVMKLREEIGRLRDENEAQKEQLKQKDEEKIEVIRQLSLAIDVLKQENVKMRNYIAKESTKKWKNPFEINKLVGAFSVKLFNGTPKNQPGVELSRCG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03343 339 Pfam KIP1-like protein 52 125 IPR011684 GO:0003779
Pumo5g03343 339 Coils Coil 206 240 - -
Pumo5g03343 339 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 50 131 IPR011684 GO:0003779
Pumo5g03343 339 PANTHER PROTEIN NETWORKED 4A 47 129 - -
Pumo5g03343 339 Coils Coil 244 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03343 Pumo-Chr5 82543925 82547102 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03343 - - gmx:100815707 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03343 5 82543925 82547102 Pumo5g03343 5 82543925 82547102 ECH
Pumo5g03343 5 82543925 82547102 Pumo3g02278 3 34862177 34865165 PCT