Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02278 ATGGCTGAAATGATGAAGAATCAACCGTCACAGTGGTGGTGGCTTGAGAGCCACAACAACACTAGACGATCCCCATGGCTCCAATCTACTCTTACTGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTACAGGACTCACCGCTCATTGGCTGAGCGGTATGATCAAGTCACTGGAATTCGCCAGCATAAGACAGGGGGATCACCTTTTTCTCCAATCAAGCATCATCAATCAGAGAAGTTGATGAGTTTTGCAGATTATGATAGCTATTCTGAGAGTTGTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGAAGGAAGTTCAGTTTGTGGCTGCAAATGATGAAGTGATGGGGCTGAAGAAAGAAATTGAGAGACTTGGTGAAGAGAACAAGGATCATAAAGATCAAATTAAGGAGAAATATAACATTTATGATGAAGTTATGGTGTTGAGGGAAGAAATAGAAGAACTCAGAAAAGAGTATAGAGTGCAGAAGGATGAACTCAACCAGAAAAGTATCATTTGTGGTGAAGTGATGATTTTGAGGAAAGAGATAGAACGACTCAGAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCGGAAAAGAGAATAGAGAGCAGAAGGATAAACTCAATCAGAAAGATATCATTTGTGATGAAGTAATGATGTTGAGGGAAGAAATAGAACTACTCAGAAAAGAGAATAGAGCGCAGAAGGATGAACTCTACCAGAAAGGTATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGAGTGCAGAATGATGAACTCAACCAGAATGGTACCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGTGCAGAAGGATGAACTCAAGCAGAAAGGTACCATTTGTGGTGAAGTAATGATGTTAAGGGAGGAGATTGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGAACCATCTCAAGCAAAAAGACCAAGAGAAAATAGAGGTGATAAGGCACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATTTACCAACAAATGGAAGAACCCATTTGAGTTTAAAAAACTCATGGGGAAGTTGTTTAATGGAGTTACAAGGAATCAACCTAGTATTGTAGCTCTCTAG 1377 0.3972 MAEMMKNQPSQWWWLESHNNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQVTGIRQHKTGGSPFSPIKHHQSEKLMSFADYDSYSESCDVEESVESEVDDPEQEEKEVQFVAANDEVMGLKKEIERLGEENKDHKDQIKEKYNIYDEVMVLREEIEELRKEYRVQKDELNQKSIICGEVMILRKEIERLREENREQKDELNQKDIICGEVMMLREEIERLGKENREQKDKLNQKDIICDEVMMLREEIELLRKENRAQKDELYQKGIICGEVMMLREEIEGLRKENRVQNDELNQNGTICGEVMMLREEIERLRKENRVQKDELKQKGTICGEVMMLREEIERVSEENMVQKNHLKQKDQEKIEVIRHLSLAIDVLKQENVKMRSFIAKEFTNKWKNPFEFKKLMGKLFNGVTRNQPSIVAL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02278 458 PANTHER PROTEIN NETWORKED 4A 4 397 - -
Pumo3g02278 458 Coils Coil 215 242 - -
Pumo3g02278 458 Coils Coil 246 270 - -
Pumo3g02278 458 Coils Coil 146 211 - -
Pumo3g02278 458 Coils Coil 308 332 - -
Pumo3g02278 458 Coils Coil 277 297 - -
Pumo3g02278 458 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Pumo3g02278 458 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Pumo3g02278 458 Coils Coil 339 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02278 Pumo-Chr3 34862177 34865165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02278 - - gmx:100527524 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02278 3 34862177 34865165 Pumo3g02278 3 34862177 34865165 ECH
Pumo5g03343 5 82543925 82547102 Pumo3g02278 3 34862177 34865165 PCT