LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g03331	ATGACAGGGCAAGTGGTGCTGACCAACGGTGGCGGATGCGGTGGTGGTGTCGGGAAGGGGCGGAGAGGCGGCGAAGAGGAGCAGGGCCCTGCGTCGCCGGTGGCGGTTCTGCTGGCGGCGCTGAGGAAATCAATGGTGGCGTGCAGCGTGGACAGTCCCGACGATGTAATCTCCGCTGTCCATCATCCCATGGAGATCGGATGGCCCACCAACGTTAAGCATGTTAGTCATGTCACCTTTGATCGCTTCAATGGCTTTCTGGGTCTTCCCCTTGAGTTAGAGGTTCATGTCCCCGCTCCGGTTCCCAGTGCTAGTGTTAGTGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCCTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTACTGCTAATGCAAGAGCGATTATACTCACAGGATGGACTAAAGGCTGAAGGCATATTTCGCATTAATCCAGAAAACAGTCAAGAGGAGCATTTGAGGGAGCAGTTGAATAAGGGCATTGTGCCTGATGACATTGATGTCCACTGCTTGGCTGGCCTAATTAAAGCATGGTTCAGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTGAGTGCAACACAGAAGAAGAATCTGTTCAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCAGCCTTGCTCAACTGGGCTATTGATCTCATGGTTGATGTTGTGGCAGAAGAGGATTATAACAAAATGGATGCAAGAAACATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCACTAACTGCTCTGATGCATGCGGTCCAAGTGATGAATTTACTAAAGACCCTAATACTGAAGACACTTAGAGAACGCGAAGAAATAGCTGCAGCAGGATATTCACCCATGTCATCTCTTTCATCCCATCGCCAATCTGAGGATGACTATGATAGTCAGCAAGAAATGGATACCAGTGGTGAATTGAGAGAGACCAAGTCAGATGATGATGATGATGATGATCATGATGTTAACTACAGTCCTGCCAGTGAAGAGGAAGAAGGGGACGCTGATGCATCAGTAAGCAAGATAGTGGAATGCTTCTTGAAACGTTTGGATGAGAAAACAAAAAGATTCTCAGAAGAACCTGCAGGGTATTTTCAAGAGAAGTTAGAGAGCCCCAAGAGTTGCTCTGGCTATAACTTGGAATCTGCTTTATCATTTACTGATATCAAAACTGTGGATTCATGCTCAAGTGCCTCTTGTGAAGATGACTCAAGAACAACTCTGACTGCTGAGGAATCAAATGCTGACACAAGTAGTCCATCAATAGAAAGTACTAGCACCAATGATGTGGAGATGATTGATAAATTTACAGATTCTGTTTCACTAGTTCCACTGTTTGCATCTAGTTAA	1410	0.461	MTGQVVLTNGGGCGGGVGKGRRGGEEEQGPASPVAVLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQDGLKAEGIFRINPENSQEEHLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVQLVKQLKPTESALLNWAIDLMVDVVAEEDYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLREREEIAAAGYSPMSSLSSHRQSEDDYDSQQEMDTSGELRETKSDDDDDDDHDVNYSPASEEEEGDADASVSKIVECFLKRLDEKTKRFSEEPAGYFQEKLESPKSCSGYNLESALSFTDIKTVDSCSSASCEDDSRTTLTAEESNADTSSPSIESTSTNDVEMIDKFTDSVSLVPLFASS	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g03331	469	Pfam	RhoGAP domain	128	262	IPR000198	GO:0007165
	Pumo5g03331	469	CDD	CRIB	64	94	-	-
	Pumo5g03331	469	ProSiteProfiles	CRIB domain profile.	66	79	IPR000095	-
	Pumo5g03331	469	SMART	RhoGAP_3	125	288	IPR000198	GO:0007165
	Pumo5g03331	469	MobiDBLite	consensus disorder prediction	299	357	-	-
	Pumo5g03331	469	Gene3D	CRIB domain	61	97	IPR036936	-
	Pumo5g03331	469	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	111	292	IPR000198	GO:0007165
	Pumo5g03331	469	FunFam	Rho GTPase-activating protein 5	96	289	-	-
	Pumo5g03331	469	SUPERFAMILY	GTPase activation domain, GAP	107	285	IPR008936	-
	Pumo5g03331	469	PANTHER	MKIAA1688 PROTEIN	25	367	IPR044785	GO:0005096
	Pumo5g03331	469	Pfam	P21-Rho-binding domain	65	93	IPR000095	-
	Pumo5g03331	469	MobiDBLite	consensus disorder prediction	309	330	-	-
	Pumo5g03331	469	MobiDBLite	consensus disorder prediction	331	353	-	-
	Pumo5g03331	469	MobiDBLite	consensus disorder prediction	415	449	-	-
	Pumo5g03331	469	Gene3D	Rho GTPase activation protein	98	292	IPR008936	-
	Pumo5g03331	469	CDD	RhoGAP	128	278	-	-
	Pumo5g03331	469	SMART	PBD_5	66	100	IPR000095	-
	Pumo5g03331	469	MobiDBLite	consensus disorder prediction	7	30	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g03331	Pumo-Chr5	82452207	82455534	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g03331	-		K20642	gmx:100812700	788.875

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g03331	5	82452207	82455534	Pumo5g03331	5	82452207	82455534	ECH
	Pumo5g03331	5	82452207	82455534	Pumo3g02287	3	34954222	34956742	PCT