Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo3g02287 | ATGACCGGAGTGGTCATGGTTACCAAGGGCGGTGGATGCGGCGGCGGCGGCGGGGGGAAGCGGACGAGGGCGGAAGAAGAAGAGCAGCAGAACCAGCTGTCCCTGGTGGCGTTTCTCTTGGCGGCCATCAGAAAGTCAATGGTGTCGTGCAGGGTGGACCCACCCGACGATGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCAACCAACGTCCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGCTTCCTCGGTCTCCCCTATGAGTTCCAAGTCGAGATCCCTGCTAGGGTCCCCAGTGCTAGTGTAAGTGTGTTTGGTGTCTCAGCAGAATCTATGCAGTGTTCTTATGATTCTAAAGGAAACAGTGTCCCCACTATTCTCTTGCTAATGCAGGACCGTCTATACTCACAGGGAGGCTTAAAGGCTGAGGGTATATTTCGCATTAACCCAGAGAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCGGATGACATCGATGTCCACTGTTTGGCGGGGCTAATTAAAGCCTGGTTCCGAGAGCTACCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCTGCCTTACTCAGCTGGGCTATTGATCTCATGGCCGATGTTGTAGAAGAGGAGGAATTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTCATAATGAAGACACTTAGAGAACGCGAAGAAACAGCAACAGATCGCCAGTCTGAGGATGAATATGACAGTCAGCAAGAAATGGACACAAGTGGCGAATTGAGAGGAACCAAATCAGATTATGATGATCATGCTCACTATGGTCATAGCAGTGAAGGGGAGGCCGAATCTTTGTGCGAGATAGAGGAGTGCTTCTTGAAGCAGTTGGATGAGAACACAAAAGGGTTCCTCAGAAGAACCTGCAGGTCATTTGGATAA | 1107 | 0.4941 | MTGVVMVTKGGGCGGGGGGKRTRAEEEEQQNQLSLVAFLLAAIRKSMVSCRVDPPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATDRQSEDEYDSQQEMDTSGELRGTKSDYDDHAHYGHSSEGEAESLCEIEECFLKQLDENTKGFLRRTCRSFG | 368 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo3g02287 | 368 | ProSiteProfiles | Rho GTPase-activating proteins domain profile. | 112 | 293 | IPR000198 | GO:0007165 | |
| Pumo3g02287 | 368 | SUPERFAMILY | GTPase activation domain, GAP | 108 | 286 | IPR008936 | - | |
| Pumo3g02287 | 368 | MobiDBLite | consensus disorder prediction | 292 | 337 | - | - | |
| Pumo3g02287 | 368 | ProSiteProfiles | CRIB domain profile. | 67 | 80 | IPR000095 | - | |
| Pumo3g02287 | 368 | MobiDBLite | consensus disorder prediction | 316 | 337 | - | - | |
| Pumo3g02287 | 368 | Gene3D | Rho GTPase activation protein | 98 | 295 | IPR008936 | - | |
| Pumo3g02287 | 368 | PANTHER | MKIAA1688 PROTEIN | 24 | 330 | IPR044785 | GO:0005096 | |
| Pumo3g02287 | 368 | SMART | PBD_5 | 67 | 101 | IPR000095 | - | |
| Pumo3g02287 | 368 | Gene3D | CRIB domain | 62 | 97 | IPR036936 | - | |
| Pumo3g02287 | 368 | Pfam | RhoGAP domain | 129 | 263 | IPR000198 | GO:0007165 | |
| Pumo3g02287 | 368 | MobiDBLite | consensus disorder prediction | 292 | 306 | - | - | |
| Pumo3g02287 | 368 | CDD | RhoGAP | 129 | 285 | - | - | |
| Pumo3g02287 | 368 | Pfam | P21-Rho-binding domain | 66 | 97 | IPR000095 | - | |
| Pumo3g02287 | 368 | FunFam | Rho GTPase-activating protein 5 | 97 | 290 | - | - | |
| Pumo3g02287 | 368 | SMART | RhoGAP_3 | 126 | 289 | IPR000198 | GO:0007165 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo3g02287 | Pumo-Chr3 | 34954222 | 34956742 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo3g02287 | - | - | gmx:100807134 | 654.055 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo3g02287 | 3 | 34954222 | 34956742 | Pumo3g02287 | 3 | 34954222 | 34956742 | ECH | |
| Pumo5g03331 | 5 | 82452207 | 82455534 | Pumo3g02287 | 3 | 34954222 | 34956742 | PCT |