Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03321 ATGATGGCCAACTCACGCGCCCTCCCCCTCCACTCCCTCCATTCGCTGAAATGGGACCTCGGCTTACCCGACACCTTCCACAAAACCCTCGTCCCCCAGTTCCCTCACGACTTCCAATTCGTCAAGTCCCCCAACGGCGTCGTTTCGCTAAAGCTATCTCGCTGGCCCGAGGAACTCGCGGTTTCCGCGTTGCAGAAGAGCAACGAGGGTGGGACCCACTACCGGGAATTCAAGCGCGGACAATCCGCGTTGGCTTTTCCTATGCGGTTTCCGAGGGGTTACGGCGCGCAGAAAAAAGTTCAGGCGTGGATGGATGAGTTTCAGAAGCTTCCCTATGTTTCTCCTTACGTGGATTCCACGAAGATTGATCCAAACAGTGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCATGAGATTTTGAGTTTGACTCTGCACAAGAAGACCAAGAGGAACTACTTGAGGGGCTTGAGGGAAGAGTTTAATCTTCCGCATAAGTTTACCCGAATTTTCACCAGGTATCCCGGGATTTTTTACCTCTCTTTGAAGTGTAAAACCACTACCGTTACTCTCAAGGAAGGGTACCAGAGTGGGAAACTGGTGGACCCGCATCCTCTTGCTCGGCATAGAGATAAGTTCTACCGTGTGATGCAGACGGGGCTTCTTTATCGCGGCGATGGCTCGTTGAAACCTCAGGAGAACAATTTGCTGCTTGAGAATGATGAACTGACTGAGGAGGAAGAGGTTGAAACCAGTGATGAACTCTGCGAGGGTGAAACCAGTGAATGA 789 0.5171 MMANSRALPLHSLHSLKWDLGLPDTFHKTLVPQFPHDFQFVKSPNGVVSLKLSRWPEELAVSALQKSNEGGTHYREFKRGQSALAFPMRFPRGYGAQKKVQAWMDEFQKLPYVSPYVDSTKIDPNSDLMEKRVVGVLHEILSLTLHKKTKRNYLRGLREEFNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLKEGYQSGKLVDPHPLARHRDKFYRVMQTGLLYRGDGSLKPQENNLLLENDELTEEEEVETSDELCEGETSE 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03321 262 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 246 IPR045040 GO:0003723
Pumo5g03321 262 MobiDBLite consensus disorder prediction 239 262 - -
Pumo5g03321 262 Pfam Plant organelle RNA recognition domain 1 220 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03321 Pumo-Chr5 82376999 82380683 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03321 - - gmx:100801315 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03321 5 82376999 82380683 Pumo5g03321 5 82376999 82380683 ECH
Pumo5g03321 5 82376999 82380683 Pumo3g02322 3 35394994 35397427 PCT