Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02322 ATGTTCTCCAAAACCAAAACCCACACTCTCTCCCACCTCAACGCAAGATCGATTTCAAGCCTAAAAGTAGTGTGGCGCAAGGACCAAGCACTCGACCGAGCCATAGAGTTCGACAAGCGCTACAAGCAATGCGCCCGCGTCGTCAAAGAAGTCCTCAACGAACCAGGCCAAGTCATCCCTCTGCGCTACCTCGAAAAACGACGCGAACGTATGCGCCTCAAGGTCAAAGCCGAAACCTTTCTCAACCAAAACCCCGGCTTGTTCGACGTCTACTATGATCGCATCAAACCCAAAACCGAACCGGTCCGGTTCCTCCGCGCCAGCGACAGGCTCCGCCAATTTCTAGAGGAAGAACAACGGATTTTCAGGGACAACGAGCCTTTGATCGTGTCCAAGTTGTGTAAACTGTTAATGATGTCGAAGAACAAGGTTGTTAGTGCTGATAAGTTGCTTCACGTGAAGAGGGAGTTCGGGTTCCCCAACGATTTTTTGGTTGATTTGGTTCCTAGGTATCCGGAATATTTTAGGTTAACTGGGTTTCCTGGGGAGGGTAAATCGTTTCTGGAGTTGGTTAATTGGAACCCCGAGTTTGCAAAATCTGTAATTGAGCAAAGGGCTGAAGAGGAGAGTGAGCGTTTGGGGATTAGGGTTAGGCCTAGTTTCAATGTGGAGCTTCCACCGGGGTTTGTGTTGAAGAAGGAGATGAGGGAGTGGGTGAGGGATTGGATGGAGCTTGATTATGTGTCCCCTTATGAGGATGTGTCCCATTTGGACCAGGCTTCTAGAGAGATGGAGAAGAGGTCCGTTGGAGTGTTCCATGAACTGCTTTCACTTTCCTTGCACAAGAGGATTCCTGTGCCGATCCTTGGAAAGTTTTGTGATGAGTATCGGTTTTCCAACGCATTTTCCAGTACTTTTACTAGGCATTCGGGGATGTTCTATTTGTCCTTGAAAGGTGGGATTGAGACGGCGGTGTTGAGAGAAGCATACAGAGGTGATGAGTTGATTGACCGCGATCCGCTGCTCCGGATAAAAGATAAGTTTGTTGAGTTGTTGGAGGAGGGGTGGAGGCAAAGAGCAGAGCAGTTGAGGTTGAAGCAAGAGAAGATTAAGGAAGATATGGAGCTATTGGCCACAAAAGTTGGTGAATGA 1152 0.4844 MFSKTKTHTLSHLNARSISSLKVVWRKDQALDRAIEFDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKVKAETFLNQNPGLFDVYYDRIKPKTEPVRFLRASDRLRQFLEEEQRIFRDNEPLIVSKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGFPGEGKSFLELVNWNPEFAKSVIEQRAEEESERLGIRVRPSFNVELPPGFVLKKEMREWVRDWMELDYVSPYEDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDEYRFSNAFSSTFTRHSGMFYLSLKGGIETAVLREAYRGDELIDRDPLLRIKDKFVELLEEGWRQRAEQLRLKQEKIKEDMELLATKVGE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02322 383 Coils Coil 360 380 - -
Pumo3g02322 383 Pfam Plant organelle RNA recognition domain 27 356 IPR021099 GO:0003723
Pumo3g02322 383 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 369 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02322 Pumo-Chr3 35394994 35397427 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02322 - - gmx:100778092 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02322 3 35394994 35397427 Pumo3g02322 3 35394994 35397427 ECH
Pumo5g03321 5 82376999 82380683 Pumo3g02322 3 35394994 35397427 PCT