Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03256 ATGTCGGTGAAGGAGTGTCACCACCACAAGGGAAAGAAGCACAAAATCTGGAAACGCATCTTCTGGGGCATAGTGATCTTCGCCTTCATCGTGTTGGTGACAATTCTGATAATATGGGCAATCCTAAAGCCTACAAAGCCAACCTTCATCCTCCAAGACGTCACCGTTTACGGCTTCAACGCCACCATCCCCAACTTCCTCACCTCAAGCTTTCAAGTCACGCTTTCCTCACGCAACCCGAATGATCAAATCGGCATCTACTACGACCGTCTCAACACCTACGTCACCTACCGGAACCAGCAAGTCACGTACCGAACCTCAATCCCTCCCTCGTACCAAGGTCACAAAGAAGAGGATGTGTGGTCCCCATTCGTCTACGGCACTAACGTCCCCGTCGCGCCCTACAACTTTGCTGGTCTCAGTCAAGACCAGACCAACGGCAACGTCCTCGTCATCGTTAAGATTGACGGTAAGGTACGATGGAAGGTTGGTGCCTTCATCTCTGGTCACTACAACCTCTATGTAAGGTGCCCTGCTTTTATAACCTTTGGCCCCCAAAGCACCGGTATTGCGCTCGGCAATAACGCCGTTAAGTATCAATTGGTTCAACGCTGCACCGTCGGGATTTGA 630 0.5095 MSVKECHHHKGKKHKIWKRIFWGIVIFAFIVLVTILIIWAILKPTKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDQIGIYYDRLNTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFAGLSQDQTNGNVLVIVKIDGKVRWKVGAFISGHYNLYVRCPAFITFGPQSTGIALGNNAVKYQLVQRCTVGI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03256 209 PANTHER OS05G0367900 PROTEIN 17 196 IPR044839 GO:0098542
Pumo5g03256 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03256 Pumo-Chr5 81623200 81624483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03256 13 177 EF-hand Containing Proteins AT5G21130 21.387 3.52e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03256 - - gmx:100795832 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03256 5 81623200 81624483 Pumo5g03256 5 81623200 81624483 ECH
Pumo5g03256 5 81623200 81624483 Pumo3g03029 3 54933509 54935487 PCT