Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03029 ATGTCGGTTGGGAAGGAGTGCGACCACCACAAGGGAAAGAAGAGGAGGATCTTCCGTCAAGTGTTCTGGTGCATAGTGGTGTTCCTCTTCATCGTTTTGCTGGCAATTCTCTTGATATGGGCAATCCTTAGGCCCACCAAACCCACCTTCATCCTCCAAGACGTCACCGTCTACGCCTTCAACGCCACCGTCGCGAACTTCTTGACGTCGAATTTTCAGGTCACGCTCATCTCGCGCAACCCGAACGACCGCATCGGAGTCTACTACGACCGCCTCGAAACCTACGTCAGTTACCGGAGCCAGCAGATCACGTACCGAACCGCCATCCCTCCGACCTACCAGGGCCACAAAGAGGTCAACATTTGGTCTCCGTTTGTCTACGGCAACAACATCCCCGTCGCGCCGTTTAACTTCCTCGGCCTCAGCCAGGACCAGGCTAGCGGCAACGTCCTCGTCACCATCAGAGCCGACGGAAGGGTCCGGTGGAAGGTCGGCACCTTCATCTCCGGCCGCTACCACCTCTACGTCCGCTGCCCCGCCTTCATCTCCTTCGGACCCCGCAGCAACGGAATTGCCGTCGGAGAAAACGCCATCAAGTTCCAGATGATCCAACGGTGCTCCGTTAGTGTCTAA 633 0.5703 MSVGKECDHHKGKKRRIFRQVFWCIVVFLFIVLLAILLIWAILRPTKPTFILQDVTVYAFNATVANFLTSNFQVTLISRNPNDRIGVYYDRLETYVSYRSQQITYRTAIPPTYQGHKEVNIWSPFVYGNNIPVAPFNFLGLSQDQASGNVLVTIRADGRVRWKVGTFISGRYHLYVRCPAFISFGPRSNGIAVGENAIKFQMIQRCSVSV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03029 210 PANTHER OS05G0367900 PROTEIN 20 207 IPR044839 GO:0098542
Pumo3g03029 210 Pfam Late embryogenesis abundant protein 78 178 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03029 Pumo-Chr3 54933509 54935487 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03029 - - gmx:100788592 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03029 3 54933509 54935487 Pumo3g03029 3 54933509 54935487 ECH
Pumo5g03256 5 81623200 81624483 Pumo3g03029 3 54933509 54935487 PCT