Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03241 ATGACGCTTGGCTCTTCAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAAAAGGGAGAAAAAGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGCACCATTATTGGCCCCTATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGTCCCCAAGTGTTCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTACAATTCATAGTTTTTCACATGCTTTCAGCTTTTACATGTTTCAATGCAATGAGTGCTGTGGTGGGAGGGAGGGAGTATACACAATGCTAA 393 0.4198 MTLGSSGSSVVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKSPSVRFHSRINMTCVNHETGVVQFIVFHMLSAFTCFNAMSAVVGGREYTQC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03241 130 Pfam Ubiquitin-conjugating enzyme 43 107 IPR000608 -
Pumo5g03241 130 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 130 IPR000608 -
Pumo5g03241 130 Gene3D Ubiquitin Conjugating Enzyme 3 122 IPR016135 -
Pumo5g03241 130 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 46 100 - -
Pumo5g03241 130 SUPERFAMILY UBC-like 11 107 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03241 Pumo-Chr5 81425976 81429980 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03241 K10704 - gmx:100789495 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03241 5 81425976 81429980 Pumo5g03241 5 81425976 81429980 ECH
Pumo5g03241 5 81425976 81429980 Pumo3g03054 3 55541160 55544550 PCT