Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03221 ATGGCTTGCACCGATAACACGGCCACCGCCGTCGCCGACGAAGCAGGCGGCGCCACCACCATCTCCGCCATGCATCCCGACATAATTCAAACTCACATCCTCACGTGCCTGGACGGTCCCGCGCTCGCCTCCGTCGCCAGCACGTGCTCCCAACTCCACGCGCTCTCGGAACACGAGCCTCTCTGGGAGAACATTTGCCACTCCAAGTGGCCCTCCACGAACGCGCCACGCGTCCGCCACGTCATCTCGACGTTCCCACGCGCGTCTCGGTCTTTTTTCTCCGACTCGTTCCCTGAGTTCGTTGCTCGCAGTTCGCGCGCGGGGGCGAACATCGAGCGCACGCCGGAGCTGGTATCGGCGGTGGACCTGTTCCACCGGGGCCGGGCGGTGCTGTCGCGGGTGGTGGAGACGGAGACGGAGTCCGGCTGGTTCCGGTGCTCGCCGTTTAGGATCGATGTTCTTGATCCAAAGGAGGCGGTGGCGACGGCGGTGGAGTATCCGAGGAGCGAGGAAGTGTGTGAGATTCTCGGGGAGGATTTGAGGCTGAGTTGGATAGTGGTGGATCCGAAAGGAAAGCGCGCGGTGAACGTGTCGAGTGGGAGAGCGGTGTCGGTGGAGCGGCACTGGCTGAGCGGGGAGGTGAGGGTGCGGTTCGCGACGGTGGTGGGCGGCGGGGAGAGGGGGTCGGCGTCGGAGGTGGCTCTGTGCAGCGTGACTGTGACGTTCGGGGGTGAGATGCAGGTGAGGGAAGCGTTTCTGCAGATGCAGGATATGGATGGAATGTTCTTGAATGGTAGGGACAGTTTGGGGATTTTGCAGCGGGCGTTGGAGGGTAAAAGGGGAACATTACTGAAGGACGGAAAGGAAGGGAGCAATAGATACTTGGAATTCATAAACAGAAAGATGCAGAGAAAGGAAAAGAAGCAGAGAGATGAGTGGAGGTTGGATATGCTCTGCGTGGCTATCGCGGTTTTGTCCTTTGCGGCTCTTTCCAAACTCTTTCTTTTCTGA 1011 0.6014 MACTDNTATAVADEAGGATTISAMHPDIIQTHILTCLDGPALASVASTCSQLHALSEHEPLWENICHSKWPSTNAPRVRHVISTFPRASRSFFSDSFPEFVARSSRAGANIERTPELVSAVDLFHRGRAVLSRVVETETESGWFRCSPFRIDVLDPKEAVATAVEYPRSEEVCEILGEDLRLSWIVVDPKGKRAVNVSSGRAVSVERHWLSGEVRVRFATVVGGGERGSASEVALCSVTVTFGGEMQVREAFLQMQDMDGMFLNGRDSLGILQRALEGKRGTLLKDGKEGSNRYLEFINRKMQRKEKKQRDEWRLDMLCVAIAVLSFAALSKLFLF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03221 336 Gene3D - 14 100 - -
Pumo5g03221 336 PANTHER F-BOX PROTEIN-RELATED 13 330 IPR045283 -
Pumo5g03221 336 SUPERFAMILY F-box domain 26 88 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03221 Pumo-Chr5 81199924 81201387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03221 - - gmx:100801673 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03221 5 81199924 81201387 Pumo5g03221 5 81199924 81201387 ECH
Pumo3g02159 3 33385718 33386455 Pumo5g03221 5 81199924 81201387 PCT