Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02159 ATGAAAAGTGAAGATGAAGGCAAAATTGGATGGCAGAGTTACAGAAACCTTGCTGCTATTTATGCAAAGCTTAAGGACTTTGAGAAAGCCGAGATGGTGCTAAAGATGCTGGAAAAACAAGTTAAGCCGAGGCAGCGCGACGCTTACCATTGCTTGCTTGGTCTTTATGCAAGGACTGGTAATCTTGGAGAGGTTCATAGAGTGTGGAATTCCCTCAAGTCTGTCACCCCAGCTGTGACCAATTCCAGCTATGATGTTATGTTTAATACCCTATGGAAGCTTAATGATATGGAGGGCATAACAAGATGCTATAAGGAGTGGGAGGCTAGTTGTGTTAGCTATGATGTGAGGTTGGTTAGAGATTGTGTTGGAGCTTACTTGGGGCAGAACATGGTGGAAGAAGCTGAATTGGTATTTGAGGAGGCTAGGAGGAGGAGCAAAGAGCCTTTGTTTAGCATTCGGGAAAAGTTGATGATGCATTTCTTGGAGAAACGTCAGTTGGATGCTGCTGTGAGGCACTTGGAGGCGGCGCTTTCAGAAGTCAAGGGTGATGAATGGCGTCCTTCAGTGCGACTTGTTTGGGATTTTCTGGAGTACTATGAAGGAGAGATGAATGTGGATGGTTGTCATGAGTTGTACAAGATCACCAAGGCTAACAATTTTGATGATTCCTGGATTGAAACTTGCTGTGCTGAAATCGCATTTCAAAATAGAATTTGTAACTTTGGCTCGGAGTGA 738 0.4404 MKSEDEGKIGWQSYRNLAAIYAKLKDFEKAEMVLKMLEKQVKPRQRDAYHCLLGLYARTGNLGEVHRVWNSLKSVTPAVTNSSYDVMFNTLWKLNDMEGITRCYKEWEASCVSYDVRLVRDCVGAYLGQNMVEEAELVFEEARRRSKEPLFSIREKLMMHFLEKRQLDAAVRHLEAALSEVKGDEWRPSVRLVWDFLEYYEGEMNVDGCHELYKITKANNFDDSWIETCCAEIAFQNRICNFGSE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02159 245 Gene3D Tetratricopeptide repeat domain 1 201 IPR011990 GO:0005515
Pumo3g02159 245 Pfam PPR repeat 13 39 IPR002885 -
Pumo3g02159 245 Pfam PPR repeat 48 73 IPR002885 -
Pumo3g02159 245 SUPERFAMILY TPR-like 12 179 IPR011990 GO:0005515
Pumo3g02159 245 PANTHER OS12G0527900 PROTEIN 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02159 Pumo-Chr3 33385718 33386455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02159 1 206 EF-hand Containing Proteins AT1G02150 33.010 1.06e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02159 - - gmx:100781679 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02159 3 33385718 33386455 Pumo3g02159 3 33385718 33386455 ECH
Pumo3g02159 3 33385718 33386455 Pumo5g03221 5 81199924 81201387 PCT