Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03122 ATGGGTGGTGGTAGATGGGGTGGTCCAGAGTCATCTTCATCCATGAAGCTCTTGTTGTTCATGGTGCCTCTCGTGCTGGTTGCAGGGCTTGTTTCTGTATTGGGTCCTAACCCCTCTAGTTGGCTCTTTACTGCGAACGCACCTCTGTTTTTGGGCTCTGTTACTTCCTCTTCCTCAACTAGCAGTGGTGCTGTGACCAACCCTTCTGAGGTGAAGCAGAGAGAAGCGTTAGTGGTGGTGGCTGTGGATAATCGTGGTGGAGAGAAAGTTATCTCTGATGTCACTGACTTCAATCACTCCTCTACTCCACCATTTTCCGTTCAGGCAATACAAGCACCTCTACAACCTAACAAGGATGAACAAAATGTTTCCCAACTTTGGGCCAACGCGACTCCTGTGAATGAGTCTTATGTTCCACCAGAGAGGCCAAAGCTGCAAAGAAAATTCAGCATCTTAGATAGAACCGAAGCTGGTCTAATACAAGCTCGAGCTGCAATTAGAGAAGCAAGAAACGGGAATCAAACACAAGATATAGACTATGTTCCAGTTGGACCAATATATAACAATGCTAATGCATTTCACAGGAGTTACTTAGAAATGGAGAAACAGTTCAAAGTATTTGTCTACGAAGAAGGGGAACCTCCAGTTTTCCATAACGGACCTTGCAAAAGCATATACTCCATGGAGGGAAGTTTCATCCATGCTATTGAGCTGAACGACCAATTCCGAACAAGAGATCCTGAGAAAGCACATGTGTTTTTCTTACCTTTTAGTGTAGCAATGTTGGTCCAATTTGTCTATGTACGTGACTCTCATGACTTTGGCCCCATAAAAAAAACTGTCACGGACTATGTCAACGTCATTGCCGGAAGATATCCCTATTGGAACCGAAGCCTTGGAGCTGATCATTTCTATCTTGCTTGTCACGATTGGGGGCCAGAGACTTCACGTTCCATTCCTAACTTGAACAAGAATTCGATCCGTGTGTTGTGCAATGCTAACACCTCAGAGGGATTCAAGCCTTCAAAGGATGTCTCTTTGCCAGAAATTAATCTCCAAACCGGTTCAATAAACGGTTTGATTGGTGGGCCATCTGCATCTAGACGTCCACTTTTGGCCTTCTTTGCTGGTGGGCTTCACGGCCCAATTAGGCCCGTTCTTCTTGAACACTGGGAAAACAAGGACGAAGTCATTCAGGTTCACAAGTACCTTCCAAAGGGTGTGTCGTACTATGACATGATGAGGAAGAGCAAGTTCTGCCTTTGTCCTAGTGGGTACGAGGTAGCAAGTCCCAGAGTGGTGGAGGCAATCTACACAGGGTGTGTCCCAGTGCTTATTTCAGATCATTATGTGCCTCCATTCAATGATGTTTTGAATTGGAAGTCCTTTTCCGTTGAGGTTTCGGTGAAGGACATTCCCAAATTGAAGGAAATTCTGTTGAGTATTTCTCCAAGGCAGTATATAAGAATGCAGAGGAGAGTGGGACAAGTTAGGAGGCATTTTGAGGTACACTCTCCTCCCAAGAGATACGATGTGTTCCATATGATCCTTCATTCTGTGTGGCTTAGAAGATTGAACTTTAGAGTCCGTGATGACCAATAA 1602 0.4494 MGGGRWGGPESSSSMKLLLFMVPLVLVAGLVSVLGPNPSSWLFTANAPLFLGSVTSSSSTSSGAVTNPSEVKQREALVVVAVDNRGGEKVISDVTDFNHSSTPPFSVQAIQAPLQPNKDEQNVSQLWANATPVNESYVPPERPKLQRKFSILDRTEAGLIQARAAIREARNGNQTQDIDYVPVGPIYNNANAFHRSYLEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGSFIHAIELNDQFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVNVIAGRYPYWNRSLGADHFYLACHDWGPETSRSIPNLNKNSIRVLCNANTSEGFKPSKDVSLPEINLQTGSINGLIGGPSASRRPLLAFFAGGLHGPIRPVLLEHWENKDEVIQVHKYLPKGVSYYDMMRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFNDVLNWKSFSVEVSVKDIPKLKEILLSISPRQYIRMQRRVGQVRRHFEVHSPPKRYDVFHMILHSVWLRRLNFRVRDDQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03122 533 Pfam Exostosin family 201 480 IPR040911 -
Pumo5g03122 533 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 19 520 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03122 Pumo-Chr5 79988813 79992902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03122 - - gmx:100806278 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03122 5 79988813 79992902 Pumo5g03122 5 79988813 79992902 ECH
Pumo5g03122 5 79988813 79992902 Pumo3g03166 3 58284465 58289934 PCT