Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03166 ATGGGTGGTAGAATATGGAATTGTTGTGCATGTTGGGGATCAGGAGCATGTTCAACAATGAAGCTCTTGTTGTTCATGGTGCCACTCTTAGTGGTTGCTGGCTTTGCTTCTTTAAAGGGTTCAAGCGTTTACGGAAGAGATTTTAATGCAAAACGTTCTGTCTCGTGGAGTTCTCTTACTCCTTCTTCAAATTCCTCTTCACAAACACTTCATCCTTCTTCAAATTCCTCTTCACAAACACTTCATCCTCCTTCAAATTCCTCTTTACAAACACTTCATCAACCTAACCAAACTAAAGTTCTCAATGTCTCCATACCCTGGTTCAATTCAACTACTATGAATGAATTAGATGAACCTCACCTGATACAAAAGCAGAAAAGAAAGTTCAGCATCTTAGATAGAAACGAAGCCGTTTTAGCACAGGTTCGAGCTGATATAAGAGAAGCTAAAAACGGGAATCAAACACGAGATTCAGATTATGTTCCGACAGGTCCAATGTATTGGAATGCTAAGGAATTTCACAGGAGCTACTTAGAAATGGAGAAACAATTCAAAGTATTTGTCTATGAAGAAGGGGAGCATCCAGTTTTCCACGATGGACCATGCAAAAGCATATACTCCACGGAGGGGACCTTCATCCATGCTATTGAAATGAATGACCATTTTCGAACAAGAGATCCCGAGAAAGCACATGTGTTTTTCCTTCCTTTTAGTGTAGTAATGATGGTTCGATATGTGTACATGAAGGACTCATACGACTTTGTTCCCATAAAAAAAACTGTCATAGACTATGTCAATCTCATTGCTGCAAGATACCCTTATTGGAACCGAAGCCTTGGAGCTGATCACTTCATGCTCTCTTGCCATGATTGGGGGCCATTGACTTCATTCTCCATACCTTACCTGCACAAGAACTCTATTCGTGTACTTTGCAATGCCAACACCTCGGAAGGATTCAACCCTGTAAAGGATGTTTCATTTCCTGAAATTAATCTCCAACCTGGTCCAATAGGTAGTTTCCTTGGTGGGCCACCTGCATCTCAACGTTCAATTTTGGCTTTCTTTGCTGGGGGAGTTCATGGCCCCATTAGGCCAATTCTTCTTGAGCACTGGGAAAACAAGGATCAAGATATTCAGGTTCACAAGTACCTCCCAAAGGGTGTTTCTTACTATGGCATGTTGAGGAAGAGCAAGTTCTGCCTTTGTCCTAGTGGGTACGAGGTTGCTAGCCCTAGAGTGGTGGAGGCAATCTACACAGGGTGTGTTCCTGTGCTCATGTCGGATCATTATGTCCCTCCTTTCAGTGATGTTTTGAATTGGAAGATGTTCTCAGTTGAGGTTTCAATGAAAGACATTCCCAACTTGAAGGACATTTTGACGAGTATTTCTCCAAGGCAGTATATAAGAATGCAGAAAAGAGTGGCTCAGATTCGGAGACACTTTGAGGTACACTCTCCACCCAAGCGATTCGATGTGTTTCATATGATTCTTCATTCTGTGTGGCTTAGGAGACTCAACTTTAGAGTCCACGATGATCAAAATGATTTGTAA 1551 0.4184 MGGRIWNCCACWGSGACSTMKLLLFMVPLLVVAGFASLKGSSVYGRDFNAKRSVSWSSLTPSSNSSSQTLHPSSNSSSQTLHPPSNSSLQTLHQPNQTKVLNVSIPWFNSTTMNELDEPHLIQKQKRKFSILDRNEAVLAQVRADIREAKNGNQTRDSDYVPTGPMYWNAKEFHRSYLEMEKQFKVFVYEEGEHPVFHDGPCKSIYSTEGTFIHAIEMNDHFRTRDPEKAHVFFLPFSVVMMVRYVYMKDSYDFVPIKKTVIDYVNLIAARYPYWNRSLGADHFMLSCHDWGPLTSFSIPYLHKNSIRVLCNANTSEGFNPVKDVSFPEINLQPGPIGSFLGGPPASQRSILAFFAGGVHGPIRPILLEHWENKDQDIQVHKYLPKGVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLMSDHYVPPFSDVLNWKMFSVEVSMKDIPNLKDILTSISPRQYIRMQKRVAQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHDDQNDL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03166 516 Pfam Exostosin family 181 462 IPR040911 -
Pumo3g03166 516 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 18 500 IPR004263 GO:0006486|GO:0016757
Pumo3g03166 516 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pumo3g03166 516 MobiDBLite consensus disorder prediction 60 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03166 Pumo-Chr3 58284465 58289934 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03166 - - gmx:100779860 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03166 3 58284465 58289934 Pumo3g03166 3 58284465 58289934 ECH
Pumo5g03122 5 79988813 79992902 Pumo3g03166 3 58284465 58289934 PCT