Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03091 ATGCAGGTTGCAGAACGAGCTCTCTTTTTGTGGAATAATGAACACATTGTCAGCTTAATTGCTCAAAACAGGACTGTAGTATTACCCATAATATTTGAAGCATTGGAGAAAAATATCCAGAGTCATTGGAACCAGGCTGTTCACGGGCTGACTGTGAACGTTCGGAAAATGTTCCAAGAAATGGATGCAGAATTATTTGAAGAGTGTCGGAGGCAGTATGCAGAGAGGGAGGCTAAAGCAAAAGAATTAGAAGAGCAGCGAGAATTGAATTGGAAAAGACTGGCAGATGCAGCTGAACAGAATGGGGTGGATATGGTCACAGCTTAG 327 0.4251 MQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEALEKNIQSHWNQAVHGLTVNVRKMFQEMDAELFEECRRQYAEREAKAKELEEQRELNWKRLADAAEQNGVDMVTA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03091 108 Coils Coil 66 86 - -
Pumo5g03091 108 Gene3D - 1 97 IPR011989 -
Pumo5g03091 108 SUPERFAMILY ARM repeat 1 80 IPR016024 -
Pumo5g03091 108 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 101 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo5g03091 108 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 1 98 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03091 Pumo-Chr5 79252963 79254530 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03091 K11584 - gmx:100798308 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03091 5 79252963 79254530 Pumo5g03091 5 79252963 79254530 ECH
Pumo5g03091 5 79252963 79254530 Pumo3g03225 3 59559892 59566512 PCT