Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03225 ATGAAAACCTTTCCCCCACGCCTCTCACGAAACGATTCGTTTTGCTCTTCCACAACCTCGCCTTCACCATCATCATCATCATCATTCAATCCTAGGGTTAGGGTTTTTTTCTCAACGAGACAAGATGTTCAAGAAAATCATGAAAGGCGGGCACAAGAAGCCCTCCAAGTCCGACGCCAGCGATCCGGCGCCGCCGCCGTACGCCGCCGCGAACCGCGGCGCTCCGTCGCCGGCCTCTGCCAATGTATTCGTGAACCACGCCTCGCGCGGCGGGGGCGGCGCCGCGGCTCCGAATTCCGTGTCGTCGACGCCGCTGACGCTCTCCTCCGGCGGCGCGATGGAGCCGGTGCCGCCGTTCCGCGACGCGCCGGTCTCGGAGCGGCAGAGTCTCTTCCTCGGAAGCTCCACGTGTGCTGCTACGTCCTCGACTTCTCTGACACGCTGAAGAACGTTAGGGAGAAGGAAATCAAGCGCCAAGCGCTGATGGACCTCGTCGACTTCATCCAATCCGGCTCCGGCAAGATAAACGAGAATTGCCAGGAGGAGATGATCAGAATGATCTCCGTCAACATTTTCCGGTGCCTCCCGCCGGCGTCGCACGAGAACACCGGCCAGGAACCCACCGATCCCGAAGAAGAGGAACCGTCCTTGGACCCCTCCTGGCCCCACCTTCAGCTCGTCTATGAGCTTCTCCTCAGATACGTTGTCTCCTCCGACACGGATACAAAAATCGCGAAACGGTATATTGACCACTCCTTCGTTCTCAAATTGCTCGATTTGTTTGACTCTGAGGACCCGCGCGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGGCCCTTTATTAGGAAAGCTATTAACAACATTTTTTACCGGTTTATATATGAGACTGAGAGGCATAGCGGTATTGGGGAGCTTCTGGAGATTCTTGGGAGCATTATTAATGGGTTTGCCTTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCGGTGGCCATGTACCACCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCGGATACGGTGATTCGGGGGTTGTTGAAGTATTGGCCGGTTACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTGGAGGAGGTGCTCGAGGCCACGCAGGCCGCGGAGTTTCAACGTTGCATGGTTCCGCTTTTTAGACAGATTTCACGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGAGCCCTCTTTTTGTGGAATAACGAGCATATTGTGAGCTTAATTGCCCAAAACAGGACTGTGATACTACCAATAATATTTGAAGCATTTGAGAAAAATATTTCCAGTCACTGGAATCAGGCAGTGCACGGACTGACCGTGAATGTTCGCAAAATGTTCCTGGAAATGGATGCAGAATTGTTTGAAGAGTGCCAGCGACAGCATGCAGAGAAAGAGGCTAAAGCCAAAGAAGTAGCAGAGCAGAGGGAACTGAATTGGAAGAGACTGGCGGATGCCGCCGCGCAGAACGGAGTGGAGGACATGGTCACAACTTAG 1617 0.5294 MKTFPPRLSRNDSFCSSTTSPSPSSSSSFNPRVRVFFSTRQDVQENHERRAQEALQVRRQRSGAAAVRRREPRRSVAGLCQCIREPRLARRGRRRGSEFRVVDAADALLRRRDGAGAAVPRRAGLGAAESLPRKLHVCCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKINENCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPSWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVAMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNISSHWNQAVHGLTVNVRKMFLEMDAELFEECQRQHAEKEAKAKEVAEQRELNWKRLADAAAQNGVEDMVTT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03225 538 SUPERFAMILY ARM repeat 131 509 IPR016024 -
Pumo3g03225 538 Coils Coil 495 515 - -
Pumo3g03225 538 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 130 527 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo3g03225 538 Gene3D - 127 526 IPR011989 -
Pumo3g03225 538 MobiDBLite consensus disorder prediction 1 32 - -
Pumo3g03225 538 MobiDBLite consensus disorder prediction 199 218 - -
Pumo3g03225 538 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 129 531 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo3g03225 538 MobiDBLite consensus disorder prediction 9 32 - -
Pumo3g03225 538 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 127 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03225 Pumo-Chr3 59559892 59566512 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03225 K11584 - gmx:100795277 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03225 3 59559892 59566512 Pumo3g03225 3 59559892 59566512 ECH
Pumo5g03091 5 79252963 79254530 Pumo3g03225 3 59559892 59566512 PCT