Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03086 ATGGGGATTCTGCAGGACGACGTAGTGATTATCAGAGAGGCAGAGAACGAAGGTGAAACCACCGTCATAACCGTCAATTGCCCCGACAAGACCGGTCTAGGTTGCGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAGATGTGTCCACCGACGGAAAATGGTGCTACATAGTTTTCTGGGTAGTGGGGAAGCAGAGGACGAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGCCCTTCTTGTTCCTCAGCTTCTGGAATTTCCTATTACCGTTCTGAATTGCAGCCTCCTAAACCCCCAGATGTATTCCTTTTGAAATTTTGTTGCCATGATCGTAAAGGCCTTTTACATGATGTTACAGAGGTTCTTAGTGAGCTAGAGCTCATCATAAACAAAGTGAAGGTGTCTACTACACCTGACGGCAAAGTGGTGGATCTGTTTTTCATCACGGATACCAGGGAACTACTACATACAAAGAAGAGAAGGGATGACACAATTGAACAGTTGTCAGCTATTTTGGGGGATCCCTTGATTACCATTGACATCGAATTGGCTGGCCCAGAAATTGCTGCTTGTTCTCAAGCGTCTTCATCCATTCCAAGTGCAATCACAGAAGATATGTTTGATTTGGAATTACCTGGTTCAATACGAAGTGGGACTTCCACATCAGATTCTGTTTCTGTTGCGATGGACAATTCGCTGAGTCCTGCTCACACGCTTGTCCAAATTATATGTCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTATGGGAGATTCTCAACAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGATGGGAAAAAGATAGTTGACCCCAGCAAGCTGAAGTCTTTGTCATCGCGCCTTAAGATGGAACTACTTCGTCCACTCAGAGTAACTGTTGTAAGCAGGGGTCCTGATACAGAGCTGCTGGTTGCAAACCCTGTGGAGTTGTCAGGCAAAGGACGACCTCTTGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTTGGCCCTTGCATCTTTTCGGTACTTACTGATCTGCTCACTATGTTACTTCCTACTGTTTCATTTCCACTCTTCACGTGCACTTAA 1167 0.443 MGILQDDVVIIREAENEGETTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVVGKQRTRWSLLKKRLIEACPSCSSASGISYYRSELQPPKPPDVFLLKFCCHDRKGLLHDVTEVLSELELIINKVKVSTTPDGKVVDLFFITDTRELLHTKKRRDDTIEQLSAILGDPLITIDIELAGPEIAACSQASSSIPSAITEDMFDLELPGSIRSGTSTSDSVSVAMDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFSTKPRGKCELDLFIVQADGKKIVDPSKLKSLSSRLKMELLRPLRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGPCIFSVLTDLLTMLLPTVSFPLFTCT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03086 388 SUPERFAMILY ACT-like 107 180 IPR045865 -
Pumo5g03086 388 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 368 IPR040217 -
Pumo5g03086 388 SUPERFAMILY ACT-like 18 81 IPR045865 -
Pumo5g03086 388 ProSiteProfiles ACT domain profile. 247 328 IPR002912 -
Pumo5g03086 388 SUPERFAMILY ACT-like 244 300 IPR045865 -
Pumo5g03086 388 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Pumo5g03086 388 Pfam ACT domain 112 168 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03086 Pumo-Chr5 79152948 79156148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03086 - - gmx:100818216 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03086 5 79152948 79156148 Pumo5g03086 5 79152948 79156148 ECH
Pumo5g03086 5 79152948 79156148 Pumo3g03231 3 59615326 59617773 PCT