Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03231 ATGGGTATACTGTACGACGACGTAGTGATCATAAGCTCGCCAGAAAAAGACGGCGACCCAACTGTTCTCACAGTTAATTGCCCTGACAAAACCGGTTTGGGCTGCGATTTGTGCCGTATCATACTCTTCTTTGGCCTCAACATAGTCAGAGGAGATGTGTCAACGGATGGGAAATGGTGCTACATAGTTTTCTGGGTGGTTGGGAAACAGAGGACGCGGTGGAGTTTGTTGAAGAAGAGGCTGGTTGAGGCATGCCCTTCTTGCTCCTCTGCTTCTGGAATCTCTTACTATCGATCTGACTTGCAGCCATCCAAGCCTTCTGATGTCTTTCTTTTGAATTTCTGTTGTCACGATCGCAAGGGGCTGCTGCATGATGTTACTGAGGTTCTTTTTGAGCTTGAACTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTGATGGATCTGTTTTTCATCACAGATACCAGGGAACTTCTACATACAAAGAAGAGAAAGGATGAAACGATTAAACACTTAACAGAGATTATGGGAGATGCCATAATTTCTATTGACATTGAATTAGTTGGCCCAGAAATTACAGCTTGTTCCCAGGCACCTCCACTCCTTCCAACTTCAATCACAGAAGATGTCTTTGATTTGGAATTGCCTGATTTGGCTCGAGGTGGAACTCTCAGATCAGATTATGTTTCTATCACGATGGACAACTTGCTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAGCATCACAAAGGTCTTCTTTATGACGTCATGAGAACTCTGAAGGACTACAACATTCAGCTTCTTGAACACTGGCATACATAA 840 0.4369 MGILYDDVVIISSPEKDGDPTVLTVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQRTRWSLLKKRLVEACPSCSSASGISYYRSDLQPSKPSDVFLLNFCCHDRKGLLHDVTEVLFELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDETIKHLTEIMGDAIISIDIELVGPEITACSQAPPLLPTSITEDVFDLELPDLARGGTLRSDYVSITMDNLLSPAHTLVQIMCQHHKGLLYDVMRTLKDYNIQLLEHWHT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03231 279 Pfam ACT domain 111 167 IPR002912 -
Pumo3g03231 279 SUPERFAMILY ACT-like 107 177 IPR045865 -
Pumo3g03231 279 SUPERFAMILY ACT-like 19 81 IPR045865 -
Pumo3g03231 279 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Pumo3g03231 279 Gene3D - 107 192 - -
Pumo3g03231 279 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 272 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03231 Pumo-Chr3 59615326 59617773 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03231 - - gmx:100816138 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03231 3 59615326 59617773 Pumo3g03231 3 59615326 59617773 ECH
Pumo5g03086 5 79152948 79156148 Pumo3g03231 3 59615326 59617773 PCT