Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03071 ATGGGAGAGAAAAAAGAAGCAGCGAAGAATGAGGGCGATAAGAAGCCCGACTCGGGAGCAAAGCAAAACGACGGACCTGTTCCTGTCGTTTTGAAACTCGACATGCATTGCGAGGGATGTGTCAAGAAGATCAAACGCGCCGTTCGCCATTTCGACGGTGTTGAAGATGTTAAGGCCGATCTATCAGGTAACAAACTAACGGTTATTGGAAAAGTCGACCCTGCCAAAGTGCGAGATAAACTGGCGGATAAAACTAAGAAGAAGGTTGAACTCGTTTCTCCTCAGCCTAAGAAAGATTCCGCCGGCGATAAACCGCCGGAGAAGAAGCCGGAAGAGAAAAAGCCCGAAGAAAAATCCCCGAAAGAGAGCACGGTGGTGTTGAAGATCAGATTGCACTGTGACGGTTGCATTCAGAAAATTCGAAAGATTATCCTCAGAATCAAAGGAGTTGAATCGGTGAACATTGAGGGAGGGAAGGATTTGGTGACCGTAAAGGGGACGATGGACGTGAAGGAAATGGTACCGTATTTGAATGAGAAGTTGAAGCGGAACGTTGAAGTGGTCCCACCCAAGAAAGAGGGTGGTGATAAGAAAGAGAAAGAGGAAAAGAAAGACAACAAGGAAGGTGGTGGTGGTGGTGGTGATAATAATAAGAAAGAGGGTGAAGGTGCACCGAAGGTGGAGGTTAACAAAATGGAGCATTACGGGTACGCGTACCCACCTCCCCCTATATACTGGTACGGTGGATACGCACCTGGTGAAGGTAGTAGTAGCAGCAGCAACTACGCGGTAGAGGTTCAACCAGGGTATTCGAATCAAGGGTATGATGGTAATTACGGGAATTACCATTACCAGCATGAGTATATGAACCAAGGGTATAATAATAATAATTACATGGCACAACCACCACCCCCGTTCTACTTGAATCCTCACCATCCTCCTCCACAGATGTTCAGCGATGAGAATCCAAATGCGTGTTCCGTGATGTGA 990 0.4697 MGEKKEAAKNEGDKKPDSGAKQNDGPVPVVLKLDMHCEGCVKKIKRAVRHFDGVEDVKADLSGNKLTVIGKVDPAKVRDKLADKTKKKVELVSPQPKKDSAGDKPPEKKPEEKKPEEKSPKESTVVLKIRLHCDGCIQKIRKIILRIKGVESVNIEGGKDLVTVKGTMDVKEMVPYLNEKLKRNVEVVPPKKEGGDKKEKEEKKDNKEGGGGGGDNNKKEGEGAPKVEVNKMEHYGYAYPPPPIYWYGGYAPGEGSSSSSNYAVEVQPGYSNQGYDGNYGNYHYQHEYMNQGYNNNNYMAQPPPPFYLNPHHPPPQMFSDENPNACSVM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03071 329 ProSiteProfiles Heavy-metal-associated domain profile. 122 193 IPR006121 GO:0046872
Pumo5g03071 329 MobiDBLite consensus disorder prediction 185 223 - -
Pumo5g03071 329 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g03071 329 MobiDBLite consensus disorder prediction 100 123 - -
Pumo5g03071 329 MobiDBLite consensus disorder prediction 1 27 - -
Pumo5g03071 329 SUPERFAMILY HMA, heavy metal-associated domain 124 184 IPR036163 GO:0046872
Pumo5g03071 329 CDD HMA 131 166 IPR006121 GO:0046872
Pumo5g03071 329 Gene3D - 27 99 - -
Pumo5g03071 329 Gene3D - 121 193 - -
Pumo5g03071 329 Pfam Heavy-metal-associated domain 33 85 IPR006121 GO:0046872
Pumo5g03071 329 Pfam Heavy-metal-associated domain 128 186 IPR006121 GO:0046872
Pumo5g03071 329 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 5 329 IPR044594 GO:0046872
Pumo5g03071 329 CDD HMA 35 90 IPR006121 GO:0046872
Pumo5g03071 329 MobiDBLite consensus disorder prediction 83 123 - -
Pumo5g03071 329 SUPERFAMILY HMA, heavy metal-associated domain 30 84 IPR036163 GO:0046872
Pumo5g03071 329 ProSiteProfiles Heavy-metal-associated domain profile. 26 89 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03071 Pumo-Chr5 78899615 78901527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03071 - - gmx:100795652 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03071 5 78899615 78901527 Pumo5g03071 5 78899615 78901527 ECH
Pumo5g03071 5 78899615 78901527 Pumo3g03262 3 60126194 60128850 PCT