Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03262 ATGGGAGAGGAAAAGCAGCAGCCTAAGAATGAAACCGAGAAGAAGCCCGAGGAGGCAGCCCCCAAGAAAGACGACGGACCCGCCCCTGTCGTTTACAAACTCGACTTGCATTGCGAGGGATGCGTCAAAAAGATCAAACGCACCTGTCGCCACTTCGAAGGTGTGGAAAAAGTTCAGGCTGATCTATCGTCGAACAAAGTGACCGTTACCGGTAAAATGGACGCCGAGAAGCTGCAAGTAAAGATCGCCGAGAGAACCAAGAAGAAGGTTGAGATCATCTCAGCCCCGCCGAAAAAAGAAGCCCCCGCAGAAAAACCGCAGGAGAAGAAGCCCGAGGAGAAGAAACCTGAGGAGAAAAAAGCAGAAGAAAAACCTAAAGAGAGTACGGTGGTTTTGAAGATCAAACTTCACTGTGACGGTTGCATTGCGAAAATTCGAAGAATCATTCTGAGGTTCAAAGGTGTTGCATCGGTGAGCCTCGACGGAAGCAAGGACTTGGTGACGGTGAAGGGAACGATGGACGTGAAGGAGATGGTGCCGTACCTGAACGAGAAGCTGAAGCGGAACGTGGAAGTGGTGCCTCCGAAGAAAGAAGGTGGTGGCGGCGACAAGAAAGAAGGCGGTGGCGAGAAGAAAGAGAAAGACGGTGGCGGCGAGAAGAAAGAGAAGGAGGAAGGCGGTGGCGAGAAGAAAGAGAAAGACGGTGGTGCTGCGGCGGCGCCGGCGCCGGCGAAGGCGGAGGTTAACAAAATGGAGTATATGTACCCGATGGCACCTCCTTCGTTCTGGTACGACGGAGGACACTTTCCCGGTCAAACAAGTTACGCTACGGAGGTTCACCCAGGGTATGGTGCTAATAATCATTACGTGGAGCCAGGGTACGTGAACCATGGTTATCCTATGCAGCCACCTCTACCGTACTACATGCACCCGCACTCACCTCCTCCGCAGATGTTCAGCGATGAAAACCCCAATGCTTGTTCCATCATGTGA 993 0.5257 MGEEKQQPKNETEKKPEEAAPKKDDGPAPVVYKLDLHCEGCVKKIKRTCRHFEGVEKVQADLSSNKVTVTGKMDAEKLQVKIAERTKKKVEIISAPPKKEAPAEKPQEKKPEEKKPEEKKAEEKPKESTVVLKIKLHCDGCIAKIRRIILRFKGVASVSLDGSKDLVTVKGTMDVKEMVPYLNEKLKRNVEVVPPKKEGGGGDKKEGGGEKKEKDGGGEKKEKEEGGGEKKEKDGGAAAAPAPAKAEVNKMEYMYPMAPPSFWYDGGHFPGQTSYATEVHPGYGANNHYVEPGYVNHGYPMQPPLPYYMHPHSPPPQMFSDENPNACSIM 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03262 330 MobiDBLite consensus disorder prediction 190 236 - -
Pumo3g03262 330 MobiDBLite consensus disorder prediction 190 243 - -
Pumo3g03262 330 MobiDBLite consensus disorder prediction 91 126 - -
Pumo3g03262 330 Gene3D - 27 92 - -
Pumo3g03262 330 SUPERFAMILY HMA, heavy metal-associated domain 31 87 IPR036163 GO:0046872
Pumo3g03262 330 CDD HMA 36 91 IPR006121 GO:0046872
Pumo3g03262 330 CDD HMA 131 171 IPR006121 GO:0046872
Pumo3g03262 330 Pfam Heavy-metal-associated domain 35 84 IPR006121 GO:0046872
Pumo3g03262 330 Pfam Heavy-metal-associated domain 133 191 IPR006121 GO:0046872
Pumo3g03262 330 Gene3D - 126 198 - -
Pumo3g03262 330 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 9 330 IPR044594 GO:0046872
Pumo3g03262 330 SUPERFAMILY HMA, heavy metal-associated domain 129 189 IPR036163 GO:0046872
Pumo3g03262 330 MobiDBLite consensus disorder prediction 101 126 - -
Pumo3g03262 330 ProSiteProfiles Heavy-metal-associated domain profile. 27 91 IPR006121 GO:0046872
Pumo3g03262 330 ProSiteProfiles Heavy-metal-associated domain profile. 127 198 IPR006121 GO:0046872
Pumo3g03262 330 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03262 Pumo-Chr3 60126194 60128850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03262 - - gmx:547884 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03262 3 60126194 60128850 Pumo3g03262 3 60126194 60128850 ECH
Pumo5g03071 5 78899615 78901527 Pumo3g03262 3 60126194 60128850 PCT