Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03025 ATGGGTTCACTAGAAAGATCAAAGAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTATGTTTTGTGATGGGGTTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTCTCAAATAGGACAGAATTTGCACCACAACCTAGTGAAATGTCACACCTCACAACAAATGTCAATAGAAGTTGGATAGCTCCAACGCCAGTGGCCATGCCCATGAAGCCTAGAATCCTTGAAAATGAAAAGAAAACAACAACAGCAACAAAGTTGAATGTAAAAGCACAGCCCCAGTTGAAGCCTAGAAGACTCATAATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCAAAAACCAATTCCACGGAACTGCCAGAGATACTAAGGAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAATTTCACTGAATTGGAAGCTGAACTAAATCACCAGAGGAATCTTGCACTTAAGCACATTGAGCACCACAGGCTCAACGGCATTGTACACTTTGCTGGCCTTTCCAATGTTTATGATCTCCGATTCTTCCATCAGCTTAGAGATATTGAGGTCTTTGGAACATGGCCAACCGCATTGTTAGCTGCACACAGGAAGAAAGTGAAAATCGAAGGACCTGTATGTGATTCATCACAGGTCATTGGTTGGCATCTAAGGAATATGAACAATGAAACTGATACAATCACTCCCCCCATTCATATTTCAAGTTTTGCATTTAATAGCTCCATCCTTTGGGACCCAGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAATTAAAGGGAATTCCACCAGAGGATTGCTCCAAAATCATGCTCTGGCGTTTCAATTTTCGTGCCCGAACCACCTCAAGTCACTAA 1041 0.4217 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTEFAPQPSEMSHLTTNVNRSWIAPTPVAMPMKPRILENEKKTTTATKLNVKAQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLRFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKIMLWRFNFRARTTSSH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03025 346 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 342 IPR005027 GO:0015018|GO:0016020
Pumo5g03025 346 CDD GlcAT-I 111 340 IPR005027 GO:0015018|GO:0016020
Pumo5g03025 346 Pfam Glycosyltransferase family 43 133 337 IPR005027 GO:0015018|GO:0016020
Pumo5g03025 346 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 112 346 IPR029044 -
Pumo5g03025 346 FunFam Glycosyltransferases 111 346 - -
Pumo5g03025 346 SUPERFAMILY Nucleotide-diphospho-sugar transferases 111 340 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03025 Pumo-Chr5 78309398 78312813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03025 1 342 Glycosyltransferase AT2G37090 61.891 9.70e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03025 K20869 - gmx:100785607 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03025 5 78309398 78312813 Pumo5g03025 5 78309398 78312813 ECH
Pumo5g03025 5 78309398 78312813 Pumo3g03305 3 60749004 60751403 PCT