Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03305 ATGGGATCACTAGAAAGATCAAGAAATAAAGTTATGTTATGGAAGAAAGCCATGGTGCATTTTTCTCTATGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCTACAGGTAATTTTATTTTTCACAGCCATGTTGCTGCTTCAAATAGTTCAGAATTTGCACCACAACCTATTGAAGTGTCACAGAAGACAACAAATGTCAATAGAAGTTGGATAGCTCCAACACCATTTCCCACAAGGTCTATAGTCCACAAGCAAACAACAAAATTGCATGTAAAACCATTGCCCAAGTTGAAGCCTAGAAGACTTATAATCATTGTAACTCCAACAAGCACAAAACTTCCCTTCCAAACAGTGGTTTTGACAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCATTGTTGTGGATTGTTGTGGAAGGGCAAACAGATTCCACAGAACTTTCGAAGACACTTAGGAAGACTGGCATCATGTATAGGCATTTGGTTTCCAAGGAAAACTTCACAGACTTGGAAGCTGAACTGAGTCACCAGAGAAATCTTGCACTCAAGCACATTGTGCATCACAGGCTAAGTGGGATCGTACACTTTGCTGAGCTTTCCAATGTTTATGATCTCGAATTCTTCCAACAACTAAGATATATTGAGGTATTTGGAACATGGCCAACGGCATTGTTAGCAACAAACAGGAAGAAAGTGATAATAGAAGGACCAGTGTGCGATTCTTCACAAGTCATAGGCTGGCATTTAAGGAATATGAACAATGAAACTGATACAATTACTCCTCCCATTCATATTTCAAGTTTTGCATTCAATAGCTCCATTCTCTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTCTTCAAGACACCTCCCAGAATTCAATCAAATTCGTGAAGCAAGTAGTTCTAGAGGATGAAGCAAAGTTGAAGGGAATTCCCCCAGAGGACTGCTCCAGAATCTTGCTTTGGCGTTTCAATTTTCATGCACGTACCACTTCAAATCATAAATACTTGACTACTACATCAGATGGTATCCGAAAATAA 1050 0.4019 MGSLERSRNKVMLWKKAMVHFSLCFVMGFFTGFAPTGNFIFHSHVAASNSSEFAPQPIEVSQKTTNVNRSWIAPTPFPTRSIVHKQTTKLHVKPLPKLKPRRLIIIVTPTSTKLPFQTVVLTRLANTIKLVPQPLLWIVVEGQTDSTELSKTLRKTGIMYRHLVSKENFTDLEAELSHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRYIEVFGTWPTALLATNRKKVIIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSLQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSRILLWRFNFHARTTSNHKYLTTTSDGIRK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03305 349 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 341 IPR029044 -
Pumo3g03305 349 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 103 347 IPR029044 -
Pumo3g03305 349 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 337 IPR005027 GO:0015018|GO:0016020
Pumo3g03305 349 FunFam Glycosyltransferases 102 342 - -
Pumo3g03305 349 CDD GlcAT-I 102 329 IPR005027 GO:0015018|GO:0016020
Pumo3g03305 349 Pfam Glycosyltransferase family 43 124 328 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03305 Pumo-Chr3 60749004 60751403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03305 1 333 Glycosyltransferase AT2G37090 60.172 1.69e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03305 K20869 - gmx:100803434 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03305 3 60749004 60751403 Pumo3g03305 3 60749004 60751403 ECH
Pumo5g03025 5 78309398 78312813 Pumo3g03305 3 60749004 60751403 PCT