Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo5g03009 | ATGGCGGCCATAACCCGCCTCGTAAAGCGCACCTCCTCCCTCTCTTCCGTGGCGCGTGGAATCTCATCTCACGCGCCGCCTCGCACGGAGAGGAATGTGCAGTGGGTGTTCCTGGGGTGCCCCGGCGTCGGAAAAGGCACCTACGCCAGCCGCCTCTGCAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTCCGCCACGAGCTCGCCTCCAACGGCCCCCTCTCTTTCCAGCTATCAGAAATTGTTAATCAAGGCAAATTGGTGTCAGATGAAATCATCATAAGTTTATTGTCAAAGAGGCTGGCTGATGGGGAAGCTAAAGGCGAATCAGGATTTATTCTTGATGGTTTTCCTAGAACAATAAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTGGTCAATCTGAAGCTGCAAGAAGAAGCACTGCTTGCAAAATGCCTTGGTAGAAGAATTTGCAATCAATGTGGAGGAAATTTTAATGTTGCCTCCATTAGCATCAAGGGTGAGAATGGGAGCCCTGGAATGTTCATGGCTCCACTTCTTCCTCCTGCACACTGTATGTCAAAGCTCATTACTCGGTCAGATGATAATGAAGCAGTAGTCAAAGAAAGGCTTCGTATATACAATGAAAAGAGTCAGCCTGTGGAGGGATTTTACCGTAGTAGAGGGAAACTGCTGGAGTTTGACCTGCCAGGAGGTATCCCAGAATCTTGGCCTAAGTTGCTGCAAGCTCTTAATCTTGATGATTATGAGGAGAAGCAATCTGCTGCAGCATAA | 798 | 0.495 | MAAITRLVKRTSSLSSVARGISSHAPPRTERNVQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRHELASNGPLSFQLSEIVNQGKLVSDEIIISLLSKRLADGEAKGESGFILDGFPRTIKQAEILEGVTDIDLVVNLKLQEEALLAKCLGRRICNQCGGNFNVASISIKGENGSPGMFMAPLLPPAHCMSKLITRSDDNEAVVKERLRIYNEKSQPVEGFYRSRGKLLEFDLPGGIPESWPKLLQALNLDDYEEKQSAAA | 265 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo5g03009 | 265 | PANTHER | NUCLEOTIDE KINASE | 26 | 250 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | Hamap | Adenylate kinase [adk]. | 33 | 253 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | PRINTS | Adenylate kinase signature | 115 | 131 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | PRINTS | Adenylate kinase signature | 36 | 49 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | PRINTS | Adenylate kinase signature | 217 | 231 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | PRINTS | Adenylate kinase signature | 200 | 215 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | PRINTS | Adenylate kinase signature | 64 | 78 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 34 | 253 | IPR027417 | - | |
| Pumo5g03009 | 265 | Gene3D | - | 21 | 256 | IPR027417 | - | |
| Pumo5g03009 | 265 | CDD | ADK | 34 | 236 | IPR000850 | GO:0005524|GO:0006139|GO:0019205 | |
| Pumo5g03009 | 265 | Pfam | Adenylate kinase | 38 | 230 | - | - | |
| Pumo5g03009 | 265 | Coils | Coil | 254 | 265 | - | - | |
| Pumo5g03009 | 265 | NCBIfam | adenylate kinase | 34 | 253 | IPR006259 | GO:0004017|GO:0005524|GO:0016776 | |
| Pumo5g03009 | 265 | ProSitePatterns | Adenylate kinase signature. | 115 | 126 | IPR033690 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo5g03009 | Pumo-Chr5 | 78109076 | 78111806 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo5g03009 | K00939 | - | gmx:102666238 | 497.664 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo5g03009 | 5 | 78109076 | 78111806 | Pumo5g03009 | 5 | 78109076 | 78111806 | ECH | |
| Pumo5g03009 | 5 | 78109076 | 78111806 | Pumo3g03327 | 3 | 61129681 | 61132850 | PCT |