Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03327 ATGGCGGCCATAACCCGCCTCGCGAAGCGCGCGTCCTTCGTCTCTCCCCTGGCGAGGAGGTGCCTGGCCTCCTCCTCCTCCTCCTCCGAAGTCAACTCTCACGCGCCGCCGCACGACGCCGTGCCGTTACGACCGTTTCCGCCGCGCGAAGATCCGAGCAAGCGGTGCGTGCAGTGGGTGTTTTTGGGATGCCCCGGCGTCGGAAAGGGAACGTACGCTAGTCGCCTCTCGAACCTCCTCGGCGTTCCTCACATCGCCACCGGCGATCTCGTTCGCGACGAACTCGCTTCCTCTGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATTATAAGTTTATTGTCAAAGAGACTTGTTGCTGGGGAAGCTAAAGGCGAATTGGGATTTATTCTTGATGGTTTTCCTCGAACTATAAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGTAATTTTAATGTTGCTTCCATTGACATCAAGGCTGAGAATGGGAGCCCTGGAATTATTATGGCTCCACTTCTTCCTCCTGCAAATTGTATGTCAAAGCTCATTACTCGATCTGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGAATATACAATGAAATGACTCAGCCTGTGGAGGAGTTTTACCGTACAAGAGGAAAATTATTGGAGTTTAACCTGCCTGGAGGAATCTCAGAATCTTGGCCGAAGTTGCTACGAGCTCTTAATCTTGATGATTATGAGGACAAGCGATCTGCTGCAGCATAA 870 0.4954 MAAITRLAKRASFVSPLARRCLASSSSSSEVNSHAPPHDAVPLRPFPPREDPSKRCVQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLSEIVKQGQLVSDEIIISLLSKRLVAGEAKGELGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKAENGSPGIIMAPLLPPANCMSKLITRSDDTEAVVKERLRIYNEMTQPVEEFYRTRGKLLEFNLPGGISESWPKLLRALNLDDYEDKRSAAA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03327 289 Hamap Adenylate kinase [adk]. 57 277 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 PANTHER NUCLEOTIDE KINASE 52 273 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 ProSitePatterns Adenylate kinase signature. 139 150 IPR033690 -
Pumo3g03327 289 NCBIfam adenylate kinase 58 276 IPR006259 GO:0004017|GO:0005524|GO:0016776
Pumo3g03327 289 CDD ADK 58 260 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 Gene3D - 48 280 IPR027417 -
Pumo3g03327 289 MobiDBLite consensus disorder prediction 26 47 - -
Pumo3g03327 289 PRINTS Adenylate kinase signature 88 102 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 PRINTS Adenylate kinase signature 139 155 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 PRINTS Adenylate kinase signature 60 73 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 PRINTS Adenylate kinase signature 224 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 PRINTS Adenylate kinase signature 241 255 IPR000850 GO:0005524|GO:0006139|GO:0019205
Pumo3g03327 289 Pfam Adenylate kinase 62 254 - -
Pumo3g03327 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03327 Pumo-Chr3 61129681 61132850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03327 K00939 - gmx:100777619 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03327 3 61129681 61132850 Pumo3g03327 3 61129681 61132850 ECH
Pumo5g03009 5 78109076 78111806 Pumo3g03327 3 61129681 61132850 PCT