Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02974 ATGAGAAGAGAATCAAAGAAGATATCTAAGTCTTCGTGGCCAAAATTAGCCAAGTGGCTCAATATAAAGAGTAGTGCTGAGAAGTTTCACTCAGAGTATGATGCAACAGCAACTGCGAAGGAAAGGAGGAAGAGTTGTTCGGACCAAGATCGTTACGTCGTCGTACCGGATGATTTATCAGAGGGGTGGGTGATGGATTCTACAAGCGGAATGAAACAACGCTCAGCTCCTGCTGCCACTGGGGCTCTGGACCTTAGGATGTTCGTGGGGACGTGGAATGTCGGAGGGAAGTCACCGAACGAAGGCTTGAATTTGAGGAATTGGCTGACGTGTCCTTCCCCAGCTGACATCTATGTAATAGGGTTCCAAGAAATCGTACCACTAAATGCGGGGAACGTGCTTGGGCCGGAGGACAGTGGCCCAGCGGCGAAGTGGCTGGGCCTTATCCGTGAAGCCTTGAACAGCAACAAGTGCGACCATGAAATGTCACACTATTACGAGGAGGAGGACAATGTCAATGGTGAACATGATCATAAAGGAAGCCTGATGGGTAGGCACTGTTTTTCGGAAGAGGAGGAGTTAGATAATGGAGAAAACTCTCCCAACAGTTCACGACGCTATTGCTTAGCAGCAAGCAAGCAAATGGTTGGTATCTTTTTGTCCGTGTGGATACGAGAGGATCTTTGCAACCATGTTACCAATTTGAAAGTCTCCAGCGTTGGTAGAGGCATCATGGGCTATCTTGGAAATAAGGGATCAGCATCAATTAGCATGACATTGTACAACACCACGTTCTGCTTCGTTTGCACCCACTTGGCTTCTGGGGAGAAATTTGGTGACGAGTTGCGAAGGAACTTGGACGTCTCAGAAATCTTGAAGAAAACTAAGTTTTGTCACTCGTTTAAATCTCTTGCTCATCCACTCCCTCCTCCTGAAAGCATACTAGAACACGATAATATTATTTGGCTTGGCGATTTGAATTATCGGCTAGCTGCTGGCTACGATGACACCCATGAGCTACTAAAGAAGAATAATTGGCAGGCATTACTAGAAAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTAGAGTATTTAAAGGTTGGAATGAAGGGAACATATACTTTGCTCCTACTTACAAATACTTGACCAATTCTGACCACTATGTTGCCCAATCCTCCAAATCCAAGGAAAAACGACGGACACCTGCTTGGTGCGATCGAATTCTGTGGAAAGGGGAAGGCCTGAATCAGATGTGGTATGTTCGAGGAGAGTCAAAATTCTCAGACCACAGGCCAGTGTATTCACTATTCTCGGTTCATTTGGACATGAAAAGCAAGAATATCATAGCTCCCTCTACTGCCACTATGCCTAGGTGCTGTCCCTTAAAACCTTTGACAAATACTGCGTTGTCATCGACTTGTTGTGCTGCTAAAGTCCAGGCAGAAGAGCAACTCTTGCTGCTAACAAGGGCACAAAGTTGCATAGACACCGTACCCAGGTTTTGA 1506 0.4608 MRRESKKISKSSWPKLAKWLNIKSSAEKFHSEYDATATAKERRKSCSDQDRYVVVPDDLSEGWVMDSTSGMKQRSAPAATGALDLRMFVGTWNVGGKSPNEGLNLRNWLTCPSPADIYVIGFQEIVPLNAGNVLGPEDSGPAAKWLGLIREALNSNKCDHEMSHYYEEEDNVNGEHDHKGSLMGRHCFSEEEELDNGENSPNSSRRYCLAASKQMVGIFLSVWIREDLCNHVTNLKVSSVGRGIMGYLGNKGSASISMTLYNTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFCHSFKSLAHPLPPPESILEHDNIIWLGDLNYRLAAGYDDTHELLKKNNWQALLEKDQLRIEQRAGRVFKGWNEGNIYFAPTYKYLTNSDHYVAQSSKSKEKRRTPAWCDRILWKGEGLNQMWYVRGESKFSDHRPVYSLFSVHLDMKSKNIIAPSTATMPRCCPLKPLTNTALSSTCCAAKVQAEEQLLLLTRAQSCIDTVPRF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02974 501 Pfam Endonuclease/Exonuclease/phosphatase family 90 430 IPR005135 GO:0003824
Pumo5g02974 501 SUPERFAMILY DNase I-like 75 445 IPR036691 -
Pumo5g02974 501 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 446 IPR045849 GO:0004445
Pumo5g02974 501 Gene3D Endonuclease/exonuclease/phosphatase 66 457 IPR036691 -
Pumo5g02974 501 SMART i5p_5 83 445 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02974 Pumo-Chr5 77641312 77647809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02974 84 441 Acyl Lipid Metabolism Gene Families AT1G65580 27.901 3.50e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02974 - - gmx:100800223 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02974 5 77641312 77647809 Pumo3g02580 3 38915459 38920515 PCT