Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02935 ATGAAGCCAGATGATCTTCCTGAGTCGAGTTTGCTAACTGCATTGAATGGAGCAAGAATTGTTTATTTGGATGGGAGATTGCATGAAACTGCTCTAGTTGTTGCACATGAAGCAGTTAAGAAGAATATACCTATCTTAATGGATGCAGAAAGGCTGAGAGAAGGGTTGGATGATCTCGTGAAATTAGCTGATTATGTCGTGTGTGCTGCACGGTTTCCACAGGCATGGACAGAGGCATCAACAATTCCTAAAGCACTTGTTTGTATGCTTTTAAGGTTGCCCAACATCAGATTTGTGATTGTAACTTTGGGAAAAGATGGTTGCATTATGCTTGAGAGACGTGTTAATGAGGATCCTTCCACTGAAGAAGTGGATGTTGACAAATTACTGGAATCCCTGGAGATGAAAAAGAATGGAAGCACACACATCCCAACCTGCATATCATCATCAGTGACAAAATTGCATGCAGAAGGTATAGGAGCAGTTTGTGGCAGGTTATACATTGGAACAGCTGAGAACATACCACCATCAGAGCTTATCGATACAACTGGTGCTGGAGATGCATTTATTGGAGCCGTTCTCTATGCTATCTGTGCCAACTTCACGCCAGAGAAAATGCTGTGCTTTGCTGCTACTGTGGCAGCTTCCAAGTGCAGAGCTCTAGGAGCAAGAAGTGGTCTCCCTTACCGAACAGACCCATGCCTAGCATCCTTCATGAAGTAG 723 0.4371 MKPDDLPESSLLTALNGARIVYLDGRLHETALVVAHEAVKKNIPILMDAERLREGLDDLVKLADYVVCAARFPQAWTEASTIPKALVCMLLRLPNIRFVIVTLGKDGCIMLERRVNEDPSTEEVDVDKLLESLEMKKNGSTHIPTCISSSVTKLHAEGIGAVCGRLYIGTAENIPPSELIDTTGAGDAFIGAVLYAICANFTPEKMLCFAATVAASKCRALGARSGLPYRTDPCLASFMK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02935 240 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 181 194 IPR002173 GO:0016301
Pumo5g02935 240 Gene3D - 1 239 IPR029056 -
Pumo5g02935 240 Pfam pfkB family carbohydrate kinase 172 228 IPR011611 -
Pumo5g02935 240 SUPERFAMILY Ribokinase-like 16 231 IPR029056 -
Pumo5g02935 240 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02935 Pumo-Chr5 76851036 76853729 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02935 - - ccaj:109795876 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02935 5 76851036 76853729 Pumo5g02935 5 76851036 76853729 ECH
Pumo5g02935 5 76851036 76853729 Pumo3g02520 3 38084668 38091210 PCT