Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02520 ATGTCTTCCGATTCTGTTCTTCCTCTCCCCGAAAATCCCATCATTGTGGGGTTTGGTGGGGTTGGAGTGGATTTTCTGGCTGTAGTGCCATCTTTTCCTAAACCTGACGCCAAGATCAGAACCACCGAATTCAAGGTCCAAGGTGGTGGAAATACTGGAAATACTATGACATGTGCTGCCCGTTTGGGCTTAAAGCCAAGAATAATTTCTAAGGTTTCAAATGATGCTCCGGGTAAAACTATGCTGGAGGAACTAGAAGCTGAAGGGGTGGATACCTCTTTTTTTGTGGTCTCGAAGGAAGGGACTTCACCATTTAGCTACATCATCGTTGACAACCAAACGAAAACAAGGACGTGTATATTCACTGCAGGATATCCTGAAATGGTCCCTCAAGATCTTCCACGAGCCAATTTGTTATCTGCACTGGATGGAGCAAGAGTGGTCTATTTTGATGCAAGGATGACTGACAGTGCTCTTGTCATTGCTCAAGAGGCATTTCGCCAGAATATATCTATCTTAATTGATGCTGAAAGGCCTAGGAAAGGATTGGACGACCTCCTGAGTTTGGCTGATTATGCTGTATGTTCAGAAAAATTTCCACAGGCCTGGACAGAGGCATCATCCATTCCAAGAGCACTAGTTTCAATTATTTTAAGATTGCCAAGACTTAAATTTGCGATTGTAACTTTGGGAAAAGATGGCTGCATAATGCTTGAGAAATGTGTGGATGATGAGGGTTCTCACATAGAAGAAATGGATGTTGAGAGCTGTTTGACATCATTAACACAGAGAAAGGATGATAGCACAGCCATGCCAACCTGCATAGCCTCGCCCGTTACAAAATTAAGAGCTGAAGGGATAGGATCTGTGTGTGGGAGGTTATATTTTGGGACATCTGAAAAGATTCCACCATCAGAGCTTATTGATACAACTGGTGCTGGGGATGCATTTGTTGGAGCTGTTTTATATGCTATCTGTGCCAACTTATCACCAGAGAAAATGTTGCCATTTGCTTCTTATGTGGTAAGCTAA 1032 0.4302 MSSDSVLPLPENPIIVGFGGVGVDFLAVVPSFPKPDAKIRTTEFKVQGGGNTGNTMTCAARLGLKPRIISKVSNDAPGKTMLEELEAEGVDTSFFVVSKEGTSPFSYIIVDNQTKTRTCIFTAGYPEMVPQDLPRANLLSALDGARVVYFDARMTDSALVIAQEAFRQNISILIDAERPRKGLDDLLSLADYAVCSEKFPQAWTEASSIPRALVSIILRLPRLKFAIVTLGKDGCIMLEKCVDDEGSHIEEMDVESCLTSLTQRKDDSTAMPTCIASPVTKLRAEGIGSVCGRLYFGTSEKIPPSELIDTTGAGDAFVGAVLYAICANLSPEKMLPFASYVVS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02520 343 Gene3D - 14 343 IPR029056 -
Pumo3g02520 343 PRINTS Ribokinase signature 226 237 IPR002139 GO:0016301
Pumo3g02520 343 PRINTS Ribokinase signature 185 200 IPR002139 GO:0016301
Pumo3g02520 343 PRINTS Ribokinase signature 44 63 IPR002139 GO:0016301
Pumo3g02520 343 PRINTS Ribokinase signature 17 38 IPR002139 GO:0016301
Pumo3g02520 343 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 2 341 - -
Pumo3g02520 343 SUPERFAMILY Ribokinase-like 15 341 IPR029056 -
Pumo3g02520 343 Pfam pfkB family carbohydrate kinase 301 341 IPR011611 -
Pumo3g02520 343 Pfam pfkB family carbohydrate kinase 18 249 IPR011611 -
Pumo3g02520 343 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 309 322 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02520 Pumo-Chr3 38084668 38091210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02520 - - gmx:100799353 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02935 5 76851036 76853729 Pumo3g02520 3 38084668 38091210 PCT