Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02879 ATGTCCAACAACAACAAGGTGAAGGGCCTCCTTAAAGGCCTAAGATTCATTTCTCAGATATTCGATAATGATGAAAAAGACTCAGAAATTCAGATTAGTAATCCCACAGATGTAAAGCATGTGGCGCATATCGGATGGGATGGTCATGGTCCCTCTGAAAATAATCCCAGCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATGCATCTGCACCCCAAAATCATAATGGAGACATTCATAGCAAAAGATCCGATAATTCAGTCCAAAGGGCCTCTGGAGGTTCAATGGAAAGAAGTGAAGAGAAGGACTTACATGAGTTGCCCAAATCATCTAAGCGGCAATCATCAAATTCAATGGGAAACATAAGAGAGTCTCATGCAAAGGAAAGGTCAGACAGGCCAAGGCCACATAAAAAATCATCCAAACCTTCATCACACCAAAATGATTTATGCAATAATGGGGATAATAGGGATTCACTCGAACGACAAGGGAGTGATTTGCCACCTAAAAAGTCTCGCCCCAAGATGTCAAAAGATGGTTCCAATGATGGTGGTGGCTCATCCAAATCCAGATCAAAACCCCATCATCATCATTCTAGGGACTCCAACTCCAATCATCATCATGAAGGCCATTCTAGACACAATTCCAAAACTAGGAACAAACATGGGTCCTTTGAAGAAGATGGACAATTTCAGAGAGAGTCTAGTGAAAATATACTGAAAAGTTACCCAAATTAG 738 0.4133 MSNNNKVKGLLKGLRFISQIFDNDEKDSEIQISNPTDVKHVAHIGWDGHGPSENNPSWMNEFKSVPGNASAPQNHNGDIHSKRSDNSVQRASGGSMERSEEKDLHELPKSSKRQSSNSMGNIRESHAKERSDRPRPHKKSSKPSSHQNDLCNNGDNRDSLERQGSDLPPKKSRPKMSKDGSNDGGGSSKSRSKPHHHHSRDSNSNHHHEGHSRHNSKTRNKHGSFEEDGQFQRESSENILKSYPN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02879 245 MobiDBLite consensus disorder prediction 43 245 - -
Pumo5g02879 245 MobiDBLite consensus disorder prediction 95 110 - -
Pumo5g02879 245 MobiDBLite consensus disorder prediction 155 178 - -
Pumo5g02879 245 Pfam P21-Rho-binding domain 31 65 IPR000095 -
Pumo5g02879 245 MobiDBLite consensus disorder prediction 219 234 - -
Pumo5g02879 245 Gene3D CRIB domain 26 76 IPR036936 -
Pumo5g02879 245 ProSiteProfiles CRIB domain profile. 32 45 IPR000095 -
Pumo5g02879 245 MobiDBLite consensus disorder prediction 53 77 - -
Pumo5g02879 245 SMART PBD_5 32 65 IPR000095 -
Pumo5g02879 245 CDD CRIB 30 64 - -
Pumo5g02879 245 MobiDBLite consensus disorder prediction 123 144 - -
Pumo5g02879 245 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 198 IPR044510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02879 Pumo-Chr5 76076947 76078543 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02879 - - gmx:102666244 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02879 5 76076947 76078543 Pumo3g02476 3 37596294 37597852 PCT