Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02476 ATGTCCGGCAACAAGGTGAAGGGCATTCTTAAAGGCTTTAGATACATAACTCAAATATTTGAGAATGAAAAAGAACAAGACATACAGATTGGATTTCCCACGGATGTAAAGCACGTGGCCCATATAGGGTGGGATGGACCCTCTGTAAATTCTCCCAGCTGGATGAACGAGTTTAAAACTGCTCCAGGATTTTCATCAACACCTCTAGATGTTCAAAATAAAGGACAGGACAATGCCATAGATTCAAAGAGAAGAAGTACTCGGAACTTGCCGGATTTAGCCAAGGCATCTAAAAGACAGTCAACGGGTGGAGTAAAGGATTCTCCATTGAGAGAAAAGTCAAACAAACCGAGACAATCTAGGAAGTCATCGAACAAACCCAAGGATGAATCCAACCCGACCCAAATACCCGTATCCATGGATCACCCACCTTCAGCCCTACCCATACCCGATATTCCTAAAAAGTCTCGTCGCCAGAAGTCAAAGGAGAATTCTAGTGGTGGGTCATCCAAATTGAGATCCAAAGCCCAACCCGCTTCGGAATCTGGATCCCCGACCCAATCCAAGTCTAGGAACAAACCAAGGACGTCCTTTGAAGAAAATGAACAGGATATCTTGATATAA 624 0.4391 MSGNKVKGILKGFRYITQIFENEKEQDIQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKTAPGFSSTPLDVQNKGQDNAIDSKRRSTRNLPDLAKASKRQSTGGVKDSPLREKSNKPRQSRKSSNKPKDESNPTQIPVSMDHPPSALPIPDIPKKSRRQKSKENSSGGSSKLRSKAQPASESGSPTQSKSRNKPRTSFEENEQDILI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02476 207 MobiDBLite consensus disorder prediction 56 207 - -
Pumo3g02476 207 MobiDBLite consensus disorder prediction 165 192 - -
Pumo3g02476 207 MobiDBLite consensus disorder prediction 77 92 - -
Pumo3g02476 207 Pfam P21-Rho-binding domain 29 61 IPR000095 -
Pumo3g02476 207 CDD CRIB 28 61 - -
Pumo3g02476 207 Gene3D CRIB domain 23 75 IPR036936 -
Pumo3g02476 207 SMART PBD_5 30 61 IPR000095 -
Pumo3g02476 207 MobiDBLite consensus disorder prediction 105 128 - -
Pumo3g02476 207 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 4 189 IPR044510 -
Pumo3g02476 207 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Pumo3g02476 207 MobiDBLite consensus disorder prediction 56 76 - -
Pumo3g02476 207 FunFam Elongation factor Ts, mitochondrial 23 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02476 Pumo-Chr3 37596294 37597852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02476 - - gmx:100790434 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02476 3 37596294 37597852 Pumo3g02476 3 37596294 37597852 ECH
Pumo5g02879 5 76076947 76078543 Pumo3g02476 3 37596294 37597852 PCT