Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02845 ATGTTTAGCTGGCAAAGGGGTGCTTTTAGTATATTCAAATGGAAACATCCAGGTGCATCTTCTCTGACAACAGGTTTACTTCAGGAAGATCCGCCGGAGATTGAATTGTCTGATTATGGAAAGATCCCCAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGAAAGCCTAAATGTAGAACCAATTGCTGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTACTATTGCGAGAAAGGGCTATGGTGCATCATTATAAAGTGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGTTTTTCAGGATTTTTTTTACTATATGTTGATTGGAATGGGCTCCGTAATGCTAAGTGTGGGATGGATGCGGTTGAATCTGGAATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCATTAACCCCACTAACACTTACCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCTCAACTAAAGGATACTCTGGAAATCCGGCATTTTTACTACAACAGTCTCTATGTTACCGACAATGAAATCCAAACCATGCCCTGGGCTACAATTCTTGAAAAAGTTGTTCTGGTACAAAGGTCTCGACAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAGAACTACTTAATCGGAATGCTCAACAAGGGTGTGCTAGCTTTCCCTATTTCACAGTGGTTTCCAGGTGCTGGTCCTACAGTGAAATCTAGTTCTAATGGAACACAGAATCGTGTAATACTAACCAAGACCCTTGAGTGGACTTTGAACTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATGTTGTGTCAAATCCAAAGACATTACGAAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCTAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATAGCAGTGTATTGCATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTCGAGGAGTCTCTACTAGAGGGCCATATATTTGGTCGGAATTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCCATTACCAATGAGCTTCTGGTCTTAGACGCTGATGGAGCAATGTCTATGGTGGTCCAGCATACACATTACATGCCGAAGAGATGGCGTGGCAAAGAAAGTACTGAAATGGTCCGTGTTGAGTTTGAAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTGCTTCTGTTTATTGTCCCAAAGCGGGTTGATGATATCTTGCGGTTCATTGCTGATTTCACTGTAAATATTGAAGGTGTTGGCCATGTTTGCAGTTTTAGTGCCTTTGATTTTCAAGAGCATGGAAACAGTCATTATGGTTCCCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCCCAAGGGAAGATGGAGAAGTCATTGCTGAGCTTTCAGAGTAGTTACCCATCATGGGAACCAAGTGCACAGGGGAGGCGGTTTTTGCTAAATCTTAGAAGATTCAGAGAAGAAAAGTTACCGGTACATGGAAACATACATGCACCTTCCCCTCCTAGAATGTGGAGGTGTAGTCCCAATATGGGAAGCAATATTGGAGACAGAAACAGGTTTATATCCAGGGAAATGCCATACAGTACTTGTGACAATCACTTGGGTTCTTTGTGGTTGATTGAAGCCAACCAAAACAATCATCCTTATCTTCTTGATTGGTACTATACATCCCGATCTCATGACACAAATCCGGGAGATGTTCCTTTAGAACCATTTGGATCTCATGATGCGAATCTGGGAGATGTTTCTTTAGAACCATTTGGAGTAATAGAGCATCGTTCTAGAGAGTATTTGATACCCTCCAACTTGACACAGAATGAAAGTGGGTATGAGGAATACTCAAACGAGTTTCGCGATGGTCGGGCTGCATCTCATCTTGGAACTTCCACTTCAGTTCCCATCTTCAGGGAAAGCGTGATTCAGGATCGAAGTTATAATGAACTGTCCCATACTACCAGGAGTCATTGGTGGGCTAGAAGTGATCCACGGGGTGGACAGACTCAGACAAGCTTTTTTGAGCCTCCAGATTTCAACCACCAAACATATGATTATCATGATAAGTTTTCTGAAAGAGGGTCAGAGGATCAAGATCATGAACAACGCATGTACTCTAGAGATGATTACAGATTATCTAGAACATACACAGATGACTTAGGGGCAGGGGAATTTAATCTTCATTTTGATGATATTTACAGCAGACCTCCAGAAACTCCCCCTGCAAGCTTTTGA 2610 0.4199 MFSWQRGAFSIFKWKHPGASSLTTGLLQEDPPEIELSDYGKIPSPGSESPSGLLNGESLNVEPIADLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTLTKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRHFYYNSLYVTDNEIQTMPWATILEKVVLVQRSRQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTVKSSSNGTQNRVILTKTLEWTLNWCILQSMFDRNFCVRRDVVSNPKTLRKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITNELLVLDADGAMSMVVQHTHYMPKRWRGKESTEMVRVEFETLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILRFIADFTVNIEGVGHVCSFSAFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSAQGRRFLLNLRRFREEKLPVHGNIHAPSPPRMWRCSPNMGSNIGDRNRFISREMPYSTCDNHLGSLWLIEANQNNHPYLLDWYYTSRSHDTNPGDVPLEPFGSHDANLGDVSLEPFGVIEHRSREYLIPSNLTQNESGYEEYSNEFRDGRAASHLGTSTSVPIFRESVIQDRSYNELSHTTRSHWWARSDPRGGQTQTSFFEPPDFNHQTYDYHDKFSERGSEDQDHEQRMYSRDDYRLSRTYTDDLGAGEFNLHFDDIYSRPPETPPASF 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02845 869 Pfam Autophagy protein ATG9 61 555 IPR007241 GO:0006914
Pumo5g02845 869 PANTHER APG9 AUTOPHAGY 9 7 821 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02845 Pumo-Chr5 75677916 75685853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02845 K17907 - gmx:100777405 1648.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02845 5 75677916 75685853 Pumo5g02845 5 75677916 75685853 ECH
Pumo5g02845 5 75677916 75685853 Pumo3g02440 3 37070359 37075474 PCT