Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02440 ATGTTTAACAGGCCAAGAGGTGCTAGTGCTTTTAATGTATTCAATTGGAAACGCCAAGGTGAATCGTCTGTGACAACAGGTTTACTTCAGGATGTTCCACCAGAGATTGAATTGTCGGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGACCTACTTAATGGTGAGAGCCTAAATGTAGAACCCATTTCTGATTTGGATTTCTTCTTCGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATTGTTGAACTTCTAAGTCTTGGTTTCACCATATGTTTTTCGGGTTTTTTCTTACTATATGTTGACTGGAATGGGCTCCGAAATGCAAAGTGTGGGATGAATGCAGTTGAATCTGGAAGGAAGCCTTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCTTTAACCCCATTTACACTTGGCAAAGCTATTATTGTTGGATACTTGGGATTATTTTCTATCTATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTAAAGGATACTTTGGAAATCCGACAGTTTTACTACAATAATCTCCGTGTTACTGATAATGAAATTCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTCTTGTGCAAAGCTCACGACAACTCTGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGTGCTGGACCTACAGTGAAATATGGTACTAATGGCACACAATATCGTCTAATACTTCCCAAGACCCTTGAGTGGACTTTGAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTCTGTGTCAGAAGAGATTTTGTGTCAAATCCAAAGACATTAACGAAAAGGCTCATGGTAGTTGGGATTGTAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCACGCTGAGCAATTTTATAATCACCCAAGAACAGCATCATCTCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAACGAGGTGGATCATCTCTTCAGGCATCGGATTAATGGCAGTGTATTACATGCTTCTAACTATATCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCATTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTAGAGGAGTCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGTTCTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAAACGGGCTGCAATTACAGATGAGCTTCTAGTCATAGACCCCGAAGGAGCAATGTCAATGGTAGTTGAGCATACACATTATATGCCCAAGAGATGGCGAGGCAAAGAAAGTACTGAAATGGTCCGGATTGAATTTGAAACCTTATTCCAGTATAGTGGGATGATGTTACTTGAGGAGATGGCCTCGATTTTCCTTACTCCATACTTACTTCTGTTGGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTTATTGAAGATTTTACTGTAGATGTTGAAGGTGTTGGTCATGTTTGCAGTTTTAGTGTCTTCAATTTTCAAGAGCATGGAAACAGTAATTATGGCTCTCAATTTAATGCACCGCGCAGCCAGAGAAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCTTCATGGGAACCAAATGATCAGGGGAAGCAGTTTCTACTAAATCTGAGAACATTCAGAGACCAAAAATTAGCAGGACATGTAAACAGACATGGATTTTCCCCTCTCAGACTGTGGAGAGGCAGTCCCAACATGGGAAGCAATGGAGACAGAAACAGATTTACATCCACGGAAATGCCATATAGTACTTTTGCAACTGGCAATCACTTGGGTTCATTGTGGCTAATTGAACCCAGCAATCAAAACAATCATCCCTATCTTCTTGATTGGTACTATACTTCCCATCCGCATGATGCAACTCAAAGACATGTTCAAGCTGATGATCCATTTGAAGTAACTGAGCATCATTCCCCAGATTGGATGCCCTCCATCTTGGTGCAAAATGAACAACATGGGTATGAAGATGAGTATCGCGATGAACGTGCCGCTTCCCATCTTGGGGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTAATTCAGGATCAACATTCCATTGATGTGCCCCTCACTACCAGGAGTCATTGGTGGGCTAGAAGTCACCCCCAGAGTGTACATGGTCAGACAAGCTTTTTTGAACCACCAGATTTCAATCACCAACCAGTATACAATTACCATGATAAGTTTTCTGATAGAGGGTCAGAGGATCATGATCAGGAACAACACTTGTACTGGGGAGATTACCACAAGTTATCTAGTACAGCACATGCAGATGATTTAGATGCAGGAGAATTCAATCTTCTTTTTGATGATGTTTATAGCAAGCCTCCAGAAAATCCCACTGTAAATCCTAGCACTGCAACCTTTTGA 2592 0.4155 MFNRPRGASAFNVFNWKRQGESSVTTGLLQDVPPEIELSDYRRIPSPGSESPSDLLNGESLNVEPISDLDFFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMNAVESGRKPCDLAKEALHQHPLTPFTLGKAIIVGYLGLFSIYWIFCFLRFFVQLKDTLEIRQFYYNNLRVTDNEIQTMPWATILEKVVLVQSSRQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKYGTNGTQYRLILPKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLTKRLMVVGIVMLLLSPFLVIFMLVYLFLRHAEQFYNHPRTASSRRWSNLSRWVFREFNEVDHLFRHRINGSVLHASNYIKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAIKRAAITDELLVIDPEGAMSMVVEHTHYMPKRWRGKESTEMVRIEFETLFQYSGMMLLEEMASIFLTPYLLLLVVPKRVDDILQFIEDFTVDVEGVGHVCSFSVFNFQEHGNSNYGSQFNAPRSQRSSQGKLEKSFLSFQSSYPSWEPNDQGKQFLLNLRTFRDQKLAGHVNRHGFSPLRLWRGSPNMGSNGDRNRFTSTEMPYSTFATGNHLGSLWLIEPSNQNNHPYLLDWYYTSHPHDATQRHVQADDPFEVTEHHSPDWMPSILVQNEQHGYEDEYRDERAASHLGASTSAPIFRESLIQDQHSIDVPLTTRSHWWARSHPQSVHGQTSFFEPPDFNHQPVYNYHDKFSDRGSEDHDQEQHLYWGDYHKLSSTAHADDLDAGEFNLLFDDVYSKPPENPTVNPSTATF 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02440 863 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Pumo3g02440 863 PANTHER APG9 AUTOPHAGY 9 2 807 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02440 Pumo-Chr3 37070359 37075474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02440 K17907 - gmx:100779344 1649.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02440 3 37070359 37075474 Pumo3g02440 3 37070359 37075474 ECH
Pumo5g02845 5 75677916 75685853 Pumo3g02440 3 37070359 37075474 PCT