Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02817 ATGTCGTCGACGTCTTCTTCAGCGCCTCATTACAGTTCTCTCCCATCGCCCTCATCTTCCAATTCTGCTCCCTACTTCGTCACACGCGCCGCGACATCCACGCGCTCCGCGTTCGCGACGCGCCGGCCGTGGGAAGAGGTGTTCGCGCTCTACTCGTTCACGCGCCCCTACTCCATCGGGGAAGCCACGATGCGCGTGAGGCGCAACCTCAACCATTTCCGCGTGAACTACTTCATGATGGTGCTATTCGTTTTATTCCTAAGCCTCCTCTGGCACCCGGTCTCGATCATCGTGTACTTGGTGGCGCTCGTGGCGTGGTTCTTCCTCTACTTCTTCCGGGACGAGCCGGTGGTGTTGTTCGGAAACTCGGTGGATGACAGGGCGGTGGCGGCGGCGCTTGCGGCTGGCGACCGTCGTGGGATTGGCGTTCACCGGCGTGTGGGTGAACGTGGTGGCTTCGGTTCTCGTTGGGGTTGCGCTTGTGGTGTTGCACGCTGCGTTTAG 504 0.6071 MSSTSSSAPHYSSLPSPSSSNSAPYFVTRAATSTRSAFATRRPWEEVFALYSFTRPYSIGEATMRVRRNLNHFRVNYFMMVLFVLFLSLLWHPVSIIVYLVALVAWFFLYFFRDEPVVLFGNSVDDRAVAAALAAGDRRGIGVHRRVGERGGFGSRWGCACGVARCV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02817 167 MobiDBLite consensus disorder prediction 1 21 - -
Pumo5g02817 167 Pfam PRA1 family protein 37 135 IPR004895 -
Pumo5g02817 167 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 22 135 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02817 Pumo-Chr5 75287709 75289243 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02817 K20359 - gmx:100794255 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02817 5 75287709 75289243 Pumo5g02817 5 75287709 75289243 ECH
Pumo5g02817 5 75287709 75289243 Pumo3g02409 3 36551721 36553593 PCT