Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02409 ATGTCGTTCATTAACCCCTCACCGCCTTCCACCTCTCCCTCCGGCTTCGCCACTCGCCGGCCATGGGAGGAGTTTTTCGCGCTCCACTCGTTCACGCGCCCCTACTCGCTCGGCGAAGCCACGCTCCGCGTGAAGCGCAACCTCGGCCACTTCCGCGTGAACTACGCCATGGTCGTGCTCCTCGTCCTGTTCCTCAGCCTCCTCTGGCACCCGATTTCCCTCATCGCGTTCCTCGCCGTCTTCGCCGCGTGGTTCTTCCTCTACTTCTTCCGCGACGGCCCCGTCGTCGTGCTCCGCCGCGAGCTCGACGACCGCCTCGTCCTCGCGGCGCTCTCCGCCGTCACCGTTGCGGCGCTCGTCCTCACCGGCGTCTGGCTCAACGTGGTGGTGGCGCTGCTCGTTTCAGCGGTGATGGTGTTGTTGCATGCGGCGCTTCGGAGCACCGAGGATTTGTACGTGGATGAATTGGAAGTTTCTGATGGAGGTTTGGTTTCGGTTGTTGGTGGTAGCCCTACGAAGCGAACAGGGTACACTAGAATATAG 543 0.6243 MSFINPSPPSTSPSGFATRRPWEEFFALHSFTRPYSLGEATLRVKRNLGHFRVNYAMVVLLVLFLSLLWHPISLIAFLAVFAAWFFLYFFRDGPVVVLRRELDDRLVLAALSAVTVAALVLTGVWLNVVVALLVSAVMVLLHAALRSTEDLYVDELEVSDGGLVSVVGGSPTKRTGYTRI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02409 180 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 16 156 IPR004895 -
Pumo3g02409 180 Pfam PRA1 family protein 16 155 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02409 Pumo-Chr3 36551721 36553593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02409 K20359 - gmx:100815700 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02409 3 36551721 36553593 Pumo3g02409 3 36551721 36553593 ECH
Pumo5g02817 5 75287709 75289243 Pumo3g02409 3 36551721 36553593 PCT