Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02814 ATGAAGCAATCGCGTCGGTGGCAGAGGACTCTGATCCTCGCTTTGCTCTCTCTGTCCGTCCTTGCTCCGCTCGTTTTCGTCTCTCACCGCCATAAAACTCTCACTCCCGTCGGACCACAAGAGTTTCTTGATGATTTATCGAGTGTTACATATAGAGCAGATCCTTTAAAGCTAAATGCAATTGAACAGGAAGGCGCTGAAGAATTAGAAGAGCCAAAGGAAGTTGTTTATAAAGAAAAAGATTTTGATTCAACCAATAGTTACATTTTGCAAAAGATTAATGATTCTGTGGAATCTAAAAGTGAGGGGTACAGAAATAACATTTTGGAAAGAAATGTTTCAGAATTCAACCAGAACAAAAGACAAGACCAGGATGCTCAGCAGAAAGAATTATTTTCCATGGATGGGGACAAGAATATATTTAATACAACAGTCGCACATAATAAGAATATACACACTCAGTCTCAAAGAATTGCGGATGAGAATGTTAAAGTGGCAGATAAGCAATCTGGTCCAAAAGCAACCCAACATCATCAGAGTTCACGCCCTCAGTCTCGGAGAGTGACAAATCAGAAGGTTTTGGAGATTAGGGATCAAATTATTAGAGCCAGAGCATACTTGGGGTTTGCTCCACCAGGCAGCAACTCACACTTGGTGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCAGTTGGAGAAGCTACTAAGGATACAGATCTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCCAACCGTGCTTTCCCAGACTGCACTGCTATGGCATCTAAGCTCCGTGCAATGAATCATAACGCTGAAGAGCAAGTTCGTTCTCATCAACACGAAGCAACACATCTTGTTCATCTTGCTGCAAGGACCACCCCAAAAGGTCTTCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCCGAGGACCGGAAGCTTCCAAATGAAAATAAGATTCATGATCCAAAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTGGTTGTTAACTCCACTGTCTCTAATGCCAAGAAACAGGAGAAACTTGTTTTCCATGTAGTGACCAATTCACTCAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAGTCCACATACAAAGCATGGAGAACTTTGAATGGTTGCCCAAGTACAATACATTCAATAAACATAATTCCAGTGATCCAAGATATACTTCTGAGTTGAACTACCTGCGTTTCTACCTGCCAGATATCTTCCCTACTTTAAATAAGATTATGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTGGACTATGGAATGCCAATATGAAAGGAAAAGTAATTGCAGCAGTTGGCACTTGTCAGGAAGGTGAAACTTCATTTCATAGGATGGATATGCTCATAAACTTCTCAGATCCATTCATTGCAAAGAGATTTGATGTCAATGCTTGCACGTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGGAGACATAATTTAACTGCTCTCTATCACAGATATTTGCAAATGGGTTCCAAGAGGCCATTGTGGAACAGTGGAAGTCTTCCTTTAGGTTGGCTCACTTTCTATAACAAGGTTAAGGTTTTGGACATACGGTGGCACATTCTTGGCCTTGGTTATGACTCAGGTGTGGATAGAAAGGAAATTGAGCGGGCTGCCGTTATACACTACGATGGCATTAGGAAACCGTGGTTGGACATTGCAATGGGAACATATAAAAGTTATTGGACCAAATTTATGAACTTTGACCACCCTATTTTGCAACGTTGCAATCTCCAGGCGTAG 1884 0.4177 MKQSRRWQRTLILALLSLSVLAPLVFVSHRHKTLTPVGPQEFLDDLSSVTYRADPLKLNAIEQEGAEELEEPKEVVYKEKDFDSTNSYILQKINDSVESKSEGYRNNILERNVSEFNQNKRQDQDAQQKELFSMDGDKNIFNTTVAHNKNIHTQSQRIADENVKVADKQSGPKATQHHQSSRPQSRRVTNQKVLEIRDQIIRARAYLGFAPPGSNSHLVKELKLRIKEMERAVGEATKDTDLSRSALQKMRHMEASLSKANRAFPDCTAMASKLRAMNHNAEEQVRSHQHEATHLVHLAARTTPKGLHCLSMQLTADYFALRPEDRKLPNENKIHDPKLYHYAVFSDNVLACAVVVNSTVSNAKKQEKLVFHVVTNSLNFPAIWMWFLLNPPGKATVHIQSMENFEWLPKYNTFNKHNSSDPRYTSELNYLRFYLPDIFPTLNKIMLFDHDVVVQQDLSGLWNANMKGKVIAAVGTCQEGETSFHRMDMLINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTALYHRYLQMGSKRPLWNSGSLPLGWLTFYNKVKVLDIRWHILGLGYDSGVDRKEIERAAVIHYDGIRKPWLDIAMGTYKSYWTKFMNFDHPILQRCNLQA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02814 627 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 342 617 IPR029044 -
Pumo5g02814 627 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 145 625 IPR029993 GO:0047262
Pumo5g02814 627 Coils Coil 271 291 - -
Pumo5g02814 627 MobiDBLite consensus disorder prediction 155 190 - -
Pumo5g02814 627 SUPERFAMILY Nucleotide-diphospho-sugar transferases 340 624 IPR029044 -
Pumo5g02814 627 Pfam Glycosyl transferase family 8 309 601 IPR002495 GO:0016757
Pumo5g02814 627 Coils Coil 219 239 - -
Pumo5g02814 627 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02814 Pumo-Chr5 75226337 75232818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02814 1 627 Glycosyltransferase AT1G06780 50.078 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02814 K13648 - gmx:100793193 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02814 5 75226337 75232818 Pumo3g02407 3 36529408 36540975 PCT