Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02407 ATGAGCAAAATTCGTCGCTGCCAGAGGATTCTCGTCCTCTCTCTCTTCTTTCTCTCCGTCGTCGCTCCTCTCGTCTTCGTCTCTCACCGCCTCAACCTTCTCACTCTTCTCGGGAGAAGAGAGTTTCTCGAAGATTTATATCGCGCTACATACAGGACCGATACTTTGAAGTTAAATGCTGTAGAACAGATTCAGGAAGGTGCTGAAGAATTAGAAGAGCCAAATCAAGTTGTTTATACGGAAAAAGATTTTGCTTCGACAATTAGTTACTATTCAGAAAAGAATAATGATTTTAAGGGTTACAGAACTACCACTTTGGAAAGAAATGGATTCAACCTAGATGAAAGACAACACCAGGGAGCTCAGCAGAATGAATTATCCTTCATGGCTCAAGGTAGGAACATACATGATTCACAGAGAATGTCAGAAAAGAATATTGAAGTGACAAATAAGAAGGTTCAAGAGATTAAGGATCAAATTAGTTTAGCCAAAGCATACTTGAAAATTGCACCACCAAGCAGCAATTTACGCTTGAGGGATTTGGAGCAGCAAACGAGAGAGATGGAATTAGCAGTTAGAGAAGCCACCCAGGATTCAGATCTGTCAACGAGTGCTTTGCAGAAAATGAGACACATGGAAGCTTCACTGTCTAAAGTCTATCGTGCTTTCCCGGACTGCTCTGCTATGGGTGCTAAGCTCCATTCAATGCATCGTCAGGCTGAAGAGCAAGTCCGTTCTCAGAGACATCAAGCAACATATCTTGTTCATCTTGCTGCAAGGACTGCCCCAAAAGGCCTTCACTGTCTTTCTATGCGGCTGACTGCAGAATACTTTGCCTTGAGGCCTGAGGAGAGAAAGCTTTCAAATGAAAATAAAATTCATCATCCAGACCTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCTGCGGTTGTTAACTCTACTATCTCTACTGCCAAGGAACAGGAGAAAGTTGTTTTCCATGTATTGACCAAATCACTCAACTTACCTGCAATCTCAATGTGGTTCTTAATAAGTCCTCCTGGCAAAGCTACAGTCCACATACAGAGCATAGACAACATTGAATGGTTGTCCAAATACAATACCTACCAGGAAAATAATTCCAGTGATCCAAGATACACTTCTGAATTGAACTACCTGCGTTTCTACCTTCCAGACGTTTTTCCTGCTTTAAATAAGATTGTGCTCTTGGATCATGATGTGGTGGTGCAACAAGATCTCAGTGAACTATGGAATATCAATATGAAGGGAAATGTAATTGGAGCAGTTGGAACTTGTCAGGAAGGAAAAATCCCTTTTCATAGGATTGATATGTTCATAAACTTGTCAGATCCAATAATTGGAGAGAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAACAGTGGAGGAGACATAATTTAACTGCTGTCTATCACAATTATTTGCAAATGGGTTTGTGGAACATTGGAAGTCTACCTTTAGGCTGGCTCACTTTCTATAACAAGACAGAGTTTTTGGATAGACAATGGCATGTTCTTGGCCTTGGTTATAGTTCGGATGTCGACCGAAATGAGATCGAGCAGGCTGCCGTTATACACTATGATGGGCTTAGGAAGCCGTGGCTGGATATTGCAATGGGCAGATATAAAAGTTATTGGACCAAATTTTTGAATTTTGACAACATTTTTTTGCAACAGTGCAATCTCCAGGCATAG 1749 0.4117 MSKIRRCQRILVLSLFFLSVVAPLVFVSHRLNLLTLLGRREFLEDLYRATYRTDTLKLNAVEQIQEGAEELEEPNQVVYTEKDFASTISYYSEKNNDFKGYRTTTLERNGFNLDERQHQGAQQNELSFMAQGRNIHDSQRMSEKNIEVTNKKVQEIKDQISLAKAYLKIAPPSSNLRLRDLEQQTREMELAVREATQDSDLSTSALQKMRHMEASLSKVYRAFPDCSAMGAKLHSMHRQAEEQVRSQRHQATYLVHLAARTAPKGLHCLSMRLTAEYFALRPEERKLSNENKIHHPDLYHYAVFSDNVLACAAVVNSTISTAKEQEKVVFHVLTKSLNLPAISMWFLISPPGKATVHIQSIDNIEWLSKYNTYQENNSSDPRYTSELNYLRFYLPDVFPALNKIVLLDHDVVVQQDLSELWNINMKGNVIGAVGTCQEGKIPFHRIDMFINLSDPIIGERFDVNACTWAFGMNLFDLQQWRRHNLTAVYHNYLQMGLWNIGSLPLGWLTFYNKTEFLDRQWHVLGLGYSSDVDRNEIEQAAVIHYDGLRKPWLDIAMGRYKSYWTKFLNFDNIFLQQCNLQA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02407 582 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 122 580 IPR029993 GO:0047262
Pumo3g02407 582 Coils Coil 178 198 - -
Pumo3g02407 582 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 301 574 IPR029044 -
Pumo3g02407 582 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 579 IPR029044 -
Pumo3g02407 582 Pfam Glycosyl transferase family 8 268 556 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02407 Pumo-Chr3 36529408 36540975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02407 1 582 Glycosyltransferase AT1G06780 48.112 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02407 K13648 - gmx:100819255 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02407 3 36529408 36540975 Pumo3g02407 3 36529408 36540975 ECH
Pumo5g02814 5 75226337 75232818 Pumo3g02407 3 36529408 36540975 PCT