Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02813 ATGGCAACCATCATCGCCGGCACCCCAACAACATCGATCACTCGCGCAGGTCTTGTGCTCAAGCGACCTGTTGGGGCCTCATCCTCTACCGTTCTTGGATTGCCAGCAATGGGTAAGGCAGGGAGAGTGAGGTGCTCCATGGAGGAAAAGCCTTCAAGCAGCTCAAACATAGGGATGGGGGCATCCTTGTTAGCAGCTGCATGCGCCGCAACCATGTCAAGCCCAGCCATGGCTTTGGTGGATGAGAGACTCAGCACTGAAGGAACCGGGCTTCCCTTTGGGCTTAGCAACAACCTTCTTGGTTGGATCCTGATCGGTGTCTTCGGTCTTGTATGGGCTCTCTTCTTTGTCTACACTTCCACTCTTGAAGAGGATGAAGAATCTGGATTGTCCCTCTAA 399 0.5338 MATIIAGTPTTSITRAGLVLKRPVGASSSTVLGLPAMGKAGRVRCSMEEKPSSSSNIGMGASLLAAACAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILIGVFGLVWALFFVYTSTLEEDEESGLSL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02813 132 Pfam Photosystem II reaction centre W protein (PsbW) 1 132 IPR009806 GO:0009507|GO:0009523|GO:0015979
Pumo5g02813 132 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 132 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02813 Pumo-Chr5 75224414 75225320 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02813 K02721 - gmx:100306223 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02813 5 75224414 75225320 Pumo3g02406 3 36526343 36528141 PCT