LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g02788	ATGGAACCAAAGTGCACCATAAACTGTCGCCGGCCGGAGTTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCGATGGAGTTTCTGTCACGCTCATGGAGTGCCTCAGCTCTCGAGGTCTCCAAAGCCCTTGCACCTCACTCTTCTTACATGCCTGATTCAAACAGCACTAACAACAACACTTCCATTCCTGAAGAAACTGCTCCCAACAACAACTCTTTCTCTGAGGACTTCTCAACCATGTCAAAGAATCAGTTCTCTTTTGCTTCCTCTGCCACTTCTCAGCTTGTCCTTGAACGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCGTTAACGTCAGGTAGATTATCTCACAGCAGCGAGCCTTTGAATGGTGGTGGTTCCTTAACCGGAACAGACAGCCCTCCGATTTCACCTTCAGATGAATTTGACGATGTTGTTAAGTTTTTTCGGGCAAACAATTCCATTCACCCTTTATTCAATGGTGGAAGAGCCAGTGCAACTATTGGCAATGGCACGGCTTGTTCAGGACCTAAAACTGTTGGAAGATGGTTTAAGGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAGCTGCATGCCACTATTTCAGTGGCTGCAGTGGCTGCAGCTGTTGCAGCTATTGCGGCTGCAACAGCAGGCTCATCTGCACCCAGCAAGGATGAGAAGATGGCAAAGACTGACATGGCTGTTGCTTCTGCAGCAACATTAGTTGCTGCACAATGTGTAGAGGCTGCTGAAGCAATGGGGGCTGAGCGTGACCACCTTGCCTCTGTGGTCAGCTCTGCTGTGAATGTGCGTTCTCCTGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTACGAGGAGCAGCAACCTTAAAAGCAAGAGCTCTGAAGGAGGTATGGAATATTGCCTCAGTGGCACCACTAGAGAGAGGCATAGGGGGGATTGGACTATGTGGTAAAAGTATTAACAGCAACACCAGCAATACCAGCACCAGTGATAGTGGGGAAATTTTCAACGGAGAAAATTTTCTAGGAGTCTGCAGCCAAGAGCTACTTGCAAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATATATGCACGGATTTACCAGCATGGCCAGGAAGACATCTTCTTGATGATGGTGAAAAGCGACGGTACTTTGGTTTGAAGACAGACTCAAGGGGGATTGTGGAGTTTGAGTGCCGAAATCAAAGAGAACATGACATCTGGACACAAGGGGTTTCAAGGCTTCTCTCCGCTGTTGCACAAAGACAAAACAGATATGGGAATTGA	1452	0.4725	MEPKCTINCRRPEFVPTPLPESPRVPMEFLSRSWSASALEVSKALAPHSSYMPDSNSTNNNTSIPEETAPNNNSFSEDFSTMSKNQFSFASSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWFKDRREKKKEENRTHNAQLHATISVAAVAAAVAAIAAATAGSSAPSKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSPDDITTLTAAAATALRGAATLKARALKEVWNIASVAPLERGIGGIGLCGKSINSNTSNTSTSDSGEIFNGENFLGVCSQELLAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLLDDGEKRRYFGLKTDSRGIVEFECRNQREHDIWTQGVSRLLSAVAQRQNRYGN	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g02788	483	PANTHER	EXPRESSED PROTEIN	16	475	IPR040269	-
	Pumo5g02788	483	MobiDBLite	consensus disorder prediction	109	140	-	-
	Pumo5g02788	483	Pfam	Auxin canalisation	20	322	IPR008546	-
	Pumo5g02788	483	MobiDBLite	consensus disorder prediction	109	144	-	-
	Pumo5g02788	483	MobiDBLite	consensus disorder prediction	49	78	-	-
	Pumo5g02788	483	MobiDBLite	consensus disorder prediction	48	78	-	-
	Pumo5g02788	483	Pfam	Plant pleckstrin homology-like region	369	474	IPR013666	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g02788	Pumo-Chr5	74854093	74858100	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g02788	-		-	gmx:100805743	816.609

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g02788	5	74854093	74858100	Pumo5g02788	5	74854093	74858100	ECH
	Pumo5g02788	5	74854093	74858100	Pumo3g02374	3	36066658	36070322	PCT