Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02374 ATGGAACCCAGGCTAACAATGAAGTGTCTCCGAAAGGAAAACCTTCCAACCAGTGGCACTCATTTGCCAGAGAGTCCACGAGTACCAATGGAGTTTCTGTCTAGATCATGGAGTGCCTCTGCTCTTGAGGTCTCTAAAGCCCTTGCACCTCCACCACTACCTCCTTCTTCATACATACCTTCCAAGCCTCCTCCTAATGCACCCTCTTGTACTGTGACTAACTCCATTTCCGAAGAAACTTCAGAGGAATTCTCAACCATGTGTGGGAACCAGTTCTCTTTTGCTTCCTCTGCCACTTCACAACTTGTCCTTGACCGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCATTGACGTCAGGTAGACTGTCTCATAGTAGTGAACCTTTGAACGGTGGTGCTGCTTCAACAGATAGTCCACCAATTTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAATAATTCCATTCATCCCTTATTCAATGGTGGAAGAACCATGAGTGGTGCTACAGGCAATGCCACTCCTTGCTCAGGACCAAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAACTACATGCTGCAATTTCTGTAGCTGCCGTGGCTGCTGCAGTTGCAGCTGTCACTGCTGCAACAGCAGCCTCATCTGCAGCCAACAAGGATGAGAAGATGGCCACGGCTGTGGCTTCTGCGGCCACGTTAGTTGCTGCTCAGTGTGTAGAGGCTGCTGAAGCAATGGGAGCTGAGAGAGACCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTCACAGCTGCAGCTGCCACAGCTCTACGAGGGGCAGCAACCTTGAAAGCAAGAGCGTCGAAGGAGGTGTGGAATATTACTGCAGTGACACCAATTGAGAGAGGCATAGGGATTGGAATGTGTGTTAAGGGCAATAACAGTAATTCTAGCACCAGTGATAGTGGGGAGATTGTCAACGGTGAAAATTTTTTGGGTGCCTGCAGCCAAGAGCTCCTTGCTAGGGGCACTGCATTACTCAAACGGACGCGTAAAGGTGATCTTCACTGGAAAATAGTTTCAGTTTATATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATGTGTGCACAAATTTACCAGCTTGGCCAGGAAGGCATCTGTTTGATGATGGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGGGGTATTGTGGAGTTTGAATGTAGAAATCAAAGAGAATATGATATCTGGACTCAAGGGGTTTCTAGACTTCTTTCCATTGTTGCACGCAGACAAAACATAAATGGGGTTTGA 1443 0.4622 MEPRLTMKCLRKENLPTSGTHLPESPRVPMEFLSRSWSASALEVSKALAPPPLPPSSYIPSKPPPNAPSCTVTNSISEETSEEFSTMCGNQFSFASSATSQLVLDRIMSQSAREEVSPLTSGRLSHSSEPLNGGAASTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRTMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHAAISVAAVAAAVAAVTAATAASSAANKDEKMATAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARASKEVWNITAVTPIERGIGIGMCVKGNNSNSSTSDSGEIVNGENFLGACSQELLARGTALLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCTNLPAWPGRHLFDDGEERRYFGLKTEARGIVEFECRNQREYDIWTQGVSRLLSIVARRQNINGV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02374 480 MobiDBLite consensus disorder prediction 114 144 - -
Pumo3g02374 480 MobiDBLite consensus disorder prediction 48 72 - -
Pumo3g02374 480 PANTHER EXPRESSED PROTEIN 16 472 IPR040269 -
Pumo3g02374 480 MobiDBLite consensus disorder prediction 114 145 - -
Pumo3g02374 480 MobiDBLite consensus disorder prediction 1 27 - -
Pumo3g02374 480 Pfam Auxin canalisation 23 323 IPR008546 -
Pumo3g02374 480 MobiDBLite consensus disorder prediction 48 67 - -
Pumo3g02374 480 Pfam Plant pleckstrin homology-like region 367 471 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02374 Pumo-Chr3 36066658 36070322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02374 - - gmx:100782024 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02374 3 36066658 36070322 Pumo3g02374 3 36066658 36070322 ECH
Pumo5g02788 5 74854093 74858100 Pumo3g02374 3 36066658 36070322 PCT