Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02783 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCAAAATCATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCAGGCAGATGATGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGCAGCAACTACTCAGAAAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGAATGCGAAGAGGTAAGAATGACCTTGATGAAGCTCAGGTTAGAGATGTGTATAACTATAGAATCTTTGTTGCCACTTGGAATGTTGCAGGGAAGTCACCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCACACATCTCCACCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACCCTGAACAACCTTCCTGGAACAAGTGGAGGATGCCACACTCCTTCACCCCTCCCTAATCCTGTTGTAGAGCTAGATGCTGATTTTGAGGAATCAATGAGGCAGAAGGCAACTTCTTTCTTTCAACGAAGATCCTTCCAATCCTTGAGTCGTAGTATGAGAATCGATAATGATATGTTAATGCCCCAAGCTTGCCTTGATCGCCGTCTCAGTGTCTGTGATAGAGTGATGTTTGGTCACAGAATGAGTGACTATGACCCCAATTATCGGTGGGGTTCCTCAGATGAAGAAAATGGCACTAGTGACTCCCCAATTGCAACACAATATTCACCAATGTCATATGGCGGTTGTTTCTCCACGGAGGACAGTGATAGACAGACGGGACACTCAAGATACTGCTTGGTTGCTAGTAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAAAGTGATATCAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTGATGGGCTATCTTGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGTTACGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCCCATCCATGACATCGGTGATGAGTATTCTCCTCAAACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATCGCCCTTTCTTACCGTGCTGCAAAAGCTCTTGTTGAGATGCATGATTGGAGGACTTTGTTAGAGAATGACCAGCTGTGTATAGAGCAGAGGCAAGGTCGAGTTTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCAACATATAAGTATTCAAACAATTCAGACAGATATGCAGGCGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGATTTTCTGATCATAGGCCAGTTTATAGCATATTCTTGGCAGAAGTTGAATCCATTAGCTGTAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGAAGCACAAGAGTTGTTTACACATTCACATGGTTACGGCTACACTGATTTGAACTACTTTTGA 1674 0.4235 MRDENSKKSKLSWPKSLVKKWFNIKSKAEDFQADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRMRRGKNDLDEAQVRDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPNPVVELDADFEESMRQKATSFFQRRSFQSLSRSMRIDNDMLMPQACLDRRLSVCDRVMFGHRMSDYDPNYRWGSSDEENGTSDSPIATQYSPMSYGGCFSTEDSDRQTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPIHDIGDEYSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWRTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESISCNQIKKSSSSRIEAQELFTHSHGYGYTDLNYF 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02783 557 Gene3D Endonuclease/exonuclease/phosphatase 70 549 IPR036691 -
Pumo5g02783 557 SMART i5p_5 193 525 IPR000300 GO:0016791|GO:0046856
Pumo5g02783 557 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Pumo5g02783 557 SUPERFAMILY DNase I-like 86 531 IPR036691 -
Pumo5g02783 557 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Pumo5g02783 557 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 534 IPR045849 GO:0004445
Pumo5g02783 557 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02783 Pumo-Chr5 74735659 74739172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02783 292 490 Acyl Lipid Metabolism Gene Families AT2G43900 31.390 1.28e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02783 - - gmx:100803074 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02783 5 74735659 74739172 Pumo5g02783 5 74735659 74739172 ECH
Pumo5g02783 5 74735659 74739172 Pumo3g02366 3 35945273 35947588 PCT