Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02366 ATGAGAGATGAGAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAATATTAAAAGCAAAAACGAGGACTTTCAGGCAGATGATGTCCTCTACGCAGGTGTCAATGAAGAGTGGAGCAGCAACTGTTCACAGAGGGAGGAATACAAAATCAAGAGAACCAAAACAGAGAGAGCAAAGAGGAGGCACTCAGATAGAATGCGGCGAGGTAAGATTGACCTTGATGCAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTAATTTGAGTCTGGAAGATTGGCTTCACTCTTCTCCTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGTAATGTTTTGGGCACAGAAGACAATGGCCCTGCCAGAAAGTGGCTAGCTCTTATTAGGAAGACCCTAAACAGTCTTCCTGGAACAAGTGGCGAATGCCACACTACTTCACCGCTTCCTGACCCCATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACCTCTTTCTTCCATCGCCGGTCTTTCCAATCCTTGAGTCATAGTATGAGAATGGACTATGACATGTCACTACCACAAGCATGCCTTGATCGCCGTCTCAGCGTTTGTGATAGAATGATGTTTGGTCACAGGACAAGTGACTATGACCCCAGTTATAGATGGGCTTCCTCAGACGATGAAAACGGCCTAGGTGACTCCCCAGTTGTAACACATTATTCACCAATGACATATAGAGGTTGTTTCTCTATGGAGGATAGAGATAGACAGACAGGCCAGTCAAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTAACAGTTTGGGTAAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTGTCTTGCGTTGGCAGAGGATTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAGGAGGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGGGTTAACGGCATGGGTGATGACAGATCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGGTTCTGTTGGAGAATGACCAGGCATGA 1308 0.435 MRDENSKKSKLSWPKTLVKKWFNIKSKNEDFQADDVLYAGVNEEWSSNCSQREEYKIKRTKTERAKRRHSDRMRRGKIDLDAAQVTDVYNYRIFAATWNVAGKSPPSNLSLEDWLHSSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKATSFFHRRSFQSLSHSMRMDYDMSLPQACLDRRLSVCDRMMFGHRTSDYDPSYRWASSDDENGLGDSPVVTHYSPMTYRGCFSMEDRDRQTGQSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGMGDDRSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHNWKVLLENDQA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02366 435 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Pumo3g02366 435 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 434 IPR045849 GO:0004445
Pumo3g02366 435 Gene3D Endonuclease/exonuclease/phosphatase 225 435 IPR036691 -
Pumo3g02366 435 Gene3D Endonuclease/exonuclease/phosphatase 70 207 IPR036691 -
Pumo3g02366 435 SMART i5p_5 225 433 IPR000300 GO:0016791|GO:0046856
Pumo3g02366 435 SUPERFAMILY DNase I-like 77 434 IPR036691 -
Pumo3g02366 435 Pfam Endonuclease/Exonuclease/phosphatase family 96 408 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02366 Pumo-Chr3 35945273 35947588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02366 292 434 Acyl Lipid Metabolism Gene Families AT2G43900 25.150 7.81e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02366 - - gmx:100788764 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02366 3 35945273 35947588 Pumo3g02366 3 35945273 35947588 ECH
Pumo5g02783 5 74735659 74739172 Pumo3g02366 3 35945273 35947588 PCT