Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02761 ATGCAGCACTATAACTACCCCATTCCCAAACACACCTTTCACTTCCTTCCTCTGCTTCTAACGCACTCTTCTTCACTTGTTAATGCCTTTGAACTCAACACAATGGAGCTTAGCAAAGTGACGCTAGAGATCTTCTCCAAACTCGAGCAGCAATGGCTCTCGCACTACGAAGCATCAACCAAAACGCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCTCCGGCGCCGCCCTCGTCCACCTCGAGGACCAGATCCGCGCCCAAACCTCCGATCCCCACGCGCAAATCGCAGATTACTTCGACATCATCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGTCGACGACGGCTTCGGCCGGCCTCTGTACTCCGCCGGAGAAGCCGTCCGCTTCGTCGCGGAAAACAACCGCGAGCTCTACAAGCCGAAGCACGGCGGCGTGTTCCGCCGACGCCGGAGATTCTCCGCGAGGAGCATGGAAAACGCGCTAAAGCGCGTTTTCCAGAGAAAAGAGGGAGAGGAACGGTTTTTGACTCTGAAGGACACGTGTAAGCCGCTCCTTATCCCTTGCTTTGACCTCAAGAGTTCTGCGCCATTCGTGTTCTCCCGAGCCGATGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCAGCGACCCCTGGCCTCTTCGCGCCCTTCCACTTCGCCTCTGTTGACGGAAAAACCTCGTGCGCCGCCGTCGACGGCGGCTTAGTGATGAACAATCCAGCAGCGGCGGCCGTCACGCACGTCCTCCACAACAAGCGCGACTTCCCGTCGGTGAACGGCGTGGAGGATCTCTTGGTTCTGTCCATCGGAAACGGAGCGCCGGCGAAGAGAATGAACAACACCGGCGAGTGCTCCACGTCGACGGTGGTTGACATTGCGCTCGACGGCGTTTCCGAGACCGTTGACCAGATGTTAGGGAACGCCTTCTGTTGGAACCGTACGGACTATGTCAGGATTCAGGCGTTCGGTTTGGGAGAAGGAAAAGAAGAGAAAGTGCTGATCGAGAGAGTCCTTGAATCGTTACCGTTTGGTGGCAAGCGGTTACTGCAGGAAACTAACGGTAACAGAATCGAGAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAGACTAGTCTGCCACCTAGTCCGTGCAAGCTTCCGCCGTAA 1215 0.5712 MQHYNYPIPKHTFHFLPLLLTHSSSLVNAFELNTMELSKVTLEIFSKLEQQWLSHYEASTKTRILSIDGGGTTAIVSGAALVHLEDQIRAQTSDPHAQIADYFDIIAGTGIGAILAAMITVDDGFGRPLYSAGEAVRFVAENNRELYKPKHGGVFRRRRRFSARSMENALKRVFQRKEGEERFLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGLFAPFHFASVDGKTSCAAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRMNNTGECSTSTVVDIALDGVSETVDQMLGNAFCWNRTDYVRIQAFGLGEGKEEKVLIERVLESLPFGGKRLLQETNGNRIESFVQRLVATGKTSLPPSPCKLPP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02761 404 PANTHER PATATIN-LIKE PROTEIN 6 34 401 - -
Pumo5g02761 404 Pfam Patatin-like phospholipase 65 267 IPR002641 GO:0006629
Pumo5g02761 404 CDD Pat17_PNPLA8_PNPLA9_like 64 364 - -
Pumo5g02761 404 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 65 268 IPR002641 GO:0006629
Pumo5g02761 404 Gene3D Cytosolic phospholipase A2 catalytic domain 51 395 - -
Pumo5g02761 404 SUPERFAMILY FabD/lysophospholipase-like 61 347 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02761 Pumo-Chr5 74411708 74413527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02761 35 401 Acyl Lipid Metabolism Gene Families AT3G63200 69.437 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02761 - - gmx:100806989 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02761 5 74411708 74413527 Pumo5g02761 5 74411708 74413527 ECH
Pumo5g02761 5 74411708 74413527 Pumo3g02346 3 35724912 35726492 PCT