Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02346 ATGGAGTTTAGTAAAGTCACTCTAGAGATCTTCTCCAAACTGGAGCAAAAATGGCTCTCACATTGTAAAGCCACCAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACTGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCTCACGCTCAGGTCGCCGATTTCTTCGACATCGTCGCTGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACGCCTTCGGCAGGCCGCTCTACACCGCCAGAGAAGCCGTCCGTCTCGTCTCCGAGAGAAACTCCGAGCTCTACAAGCTCAAATCCGGCGGTGTCTTCCGCCGGCGCCGGAGATTCTCCTCCAGGAGCATGGACAACGTGTTGAAGCAAGTGTTCCAGAGAAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTCCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGCGCCGACGCGTCCGAGTCTCCGGGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGCGCCACGTCAGCGACGCCGAGCCATTTCAAGCCGTTCGACTTCGCTTCCGTCGACGGCAAGACCTCGTGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCTACGGCGGCGGCCGTCACGCACGTTCTCCACAACAAGCGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTGGTCCTTTCCTTGGGGAACGGATCGTCGAACGCAAAAGCGTGCGAGAGTCGCACGTGCTCCACGCCGTCGGTGGTTGACATTGTGCTCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCGTTCGGTTTGGGAAGTGAAGCAATGAAGAAGGATGAGGTTCTCAAAGAGAGGGGACTCGAGTCTTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAACCAAGCCCGCCGTCTAGTCCTTGCAAGGATTCCGCCGTCAACCCTCTCGCAAACGGCCGCTAG 1140 0.5816 MEFSKVTLEIFSKLEQKWLSHCKATNKTRILSIDGGGTTAIVAGEALIYLEDQIRLHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSGGVFRRRRRFSSRSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPGFDFELWKVCRATSATPSHFKPFDFASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSNAKACESRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSEAMKKDEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSSPCKDSAVNPLANGR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02346 379 PANTHER PATATIN-LIKE PROTEIN 6 1 369 - -
Pumo3g02346 379 CDD Pat17_PNPLA8_PNPLA9_like 30 321 - -
Pumo3g02346 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Pumo3g02346 379 SUPERFAMILY FabD/lysophospholipase-like 26 320 IPR016035 -
Pumo3g02346 379 Gene3D Cytosolic phospholipase A2 catalytic domain 17 360 - -
Pumo3g02346 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Pumo3g02346 379 MobiDBLite consensus disorder prediction 357 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02346 Pumo-Chr3 35724912 35726492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02346 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 71.429 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02346 - - gmx:100777557 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02346 3 35724912 35726492 Pumo3g02346 3 35724912 35726492 ECH
Pumo5g02761 5 74411708 74413527 Pumo3g02346 3 35724912 35726492 PCT