Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02742 ATGGAAGAACTACACCACAAAAACAGTCAAAGGATTATCGCCATGTCAGTTGCGCCAGTTGAGAGTATCCCCTCATTAAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCTAGTGCAGCATGTACTTGTGCAGCGTTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAATGTATGTTCATCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGATTGTTTCCCTCTTATTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCTTGAGTACCCAGACAATTGGACTGAAGCTGAATATTATGGGGATATGAATGAATCTGAAAGCATCTCTCCATCAGATTTTGTTTCTATAGTAGATATTAGGTTCAAGGGGAAACCAATCTGTTCCAAAGTTCTCTGGGGAATTCCAAATGCAAATGGCTATGATGGTTGGTTCTACAACTGCCCTTTCCGGATTGATATTCTCACTTATGCAGATAGAGATGATAACAATGATGGAGCGGTTCACCTTTCTGTATCTGATGGTCTGCCACCAATTACATCCTTGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAGCTCCGTGAAGGGCTCCAGCTTAGTTGGATTATAGTAAACAGGAAAATAAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGACAAAGACACTGGCCAACAGATAAGGATTTTGTTATCCGCTTTGGATCAGTTCTACCTGCCAAGGACATTCTTCCTTGTCAGGTAGTGGAGTGTATCCTTATTATGAAGTTTAGAGTGGTTCACACCGAAGAAGATGGGGTTCAAACAACTCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATACTTAAGGAAGCACTTAGCAGCCGAAGGAGCAAGAATTACGGTGAAGTACTTGAGTCTTGTCACATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAGTAGGTTGGATAGACTTTGTATTTTAAGTGGCATTGCGGCGTTTATGACATTCTGGTACTGTGTTTTATGA 1164 0.4115 MEELHHKNSQRIIAMSVAPVESIPSLSSDLFYDIFRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADCFPLIVNKEVVEYQPNNYLEYPDNWTEAEYYGDMNESESISPSDFVSIVDIRFKGKPICSKVLWGIPNANGYDGWFYNCPFRIDILTYADRDDNNDGAVHLSVSDGLPPITSLERERKDGKLWRELREGLQLSWIIVNRKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVVECILIMKFRVVHTEEDGVQTTLKLTELSMQLEDMEGAHVNGRNSLHILKEALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02742 387 PANTHER F-BOX PROTEIN-RELATED 20 384 IPR045283 -
Pumo5g02742 387 Gene3D - 12 109 - -
Pumo5g02742 387 SUPERFAMILY F-box domain 20 93 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02742 Pumo-Chr5 74103165 74106700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02742 - - gmx:100500689 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02742 5 74103165 74106700 Pumo5g02742 5 74103165 74106700 ECH
Pumo5g02742 5 74103165 74106700 Pumo3g01985 3 30994351 30997488 PCT