Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02719 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCACCGGCAATGGTGCCGCCGCCGCTGCTCGTCTCCGACTCCTTCGCCAAGGATGCCATTCTCGCCTGGTTCCGCGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCCCTCTGCGGCCACCTCGCGCACCTCGCCGCCGCCTCCTCCGACTACGAAGCCGCCTTCGCCGCCATCCACCGCCGCCGCCTCAACTGGATCCCCGTCATCCAGATGCAGAAGTATCACTCCATCGCCGCCGTCACTCTCGAGCTCCGCAGAGTCGCCGAGAAGAAAATCGAGCACGAAGGCACCAAGAAAAGCGAGAGCAGCTTCGACGAGGATGGGAAATTGGAGAAGGAAACGGCGGAAAATGGCGGAAACGCCGGTGACGACGAAGCTGCTCCGGAGTATGATTCACCGGACAGTGAAATTACTGATTCAGGATCTCAGGAAATGCAACCCAGTGTGATGAACAGCAGTATATGTTCCAATCATGAAGAATGTGAAGGACGTTCTTCACAGATAAAGCTGACAAAAGGTTTCACAGCAAAGGAGTCCGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGATGTTTTTTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTGAATGAGATTCATGCTGCTGGCCAGAATGGGGAGCTCTCAGGTGAAACTTTTATACTATTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCGATATTTGGACAGATAAAGGACGATACCAAAAGCAATATAGAGCCGATTCCAGCACTTCTTCATGATGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGACCAACCTCTATCCACCCTTCTTCTCTCCGAATCAACAATGGCTTTTGGGCGTATCCTAATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGGAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCATGTAATGTGTCCATCCCATAACAGAAGGGTGAGCATCACCTTCTTTAGAGTGAGACCAGACTCCCATCAATGTCAATCACCAACTACTCCTACCATGACAAGTGCGATGACTCTTTGGCAACCTGGCATTGCTGCTAGCCCATTTACTATGCCAAATGGAGCTCTAAGTGGCTATGAGGCTGCTGCTATGGATATGATGCCCAATTGGGGAATAGTTAGTGCTCCAATGGTCATGCTAGCCCCTATGCGCCCTATGGCAGTGAACCCTCGCAAACTTCCTCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGGGCATCCAGAAAACACGCAAGGCATCTTCCACCGCGTGCTCAAAAAGGACGCCTTATGGAATTACCCTCCCCAGTTGAAAAATCACACATGGGAGAGTCTACTTCTGAACCCACCATTGCTGTTGAAGGATAG 1569 0.5022 MAAVPASRTDPPAMVPPPLLVSDSFAKDAILAWFRGEFAAANAIIDALCGHLAHLAAASSDYEAAFAAIHRRRLNWIPVIQMQKYHSIAAVTLELRRVAEKKIEHEGTKKSESSFDEDGKLEKETAENGGNAGDDEAAPEYDSPDSEITDSGSQEMQPSVMNSSICSNHEECEGRSSQIKLTKGFTAKESVKGHMVNVVKGLKLYEDVFSESEICKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKSNIEPIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKEGSLLVMRGNSADMARHVMCPSHNRRVSITFFRVRPDSHQCQSPTTPTMTSAMTLWQPGIAASPFTMPNGALSGYEAAAMDMMPNWGIVSAPMVMLAPMRPMAVNPRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMELPSPVEKSHMGESTSEPTIAVEG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02719 522 SUPERFAMILY Clavaminate synthase-like 192 392 - -
Pumo5g02719 522 MobiDBLite consensus disorder prediction 146 168 - -
Pumo5g02719 522 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 133 IPR044842 GO:0003729|GO:0006402|GO:0032451
Pumo5g02719 522 MobiDBLite consensus disorder prediction 481 522 - -
Pumo5g02719 522 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 296 393 IPR005123 -
Pumo5g02719 522 MobiDBLite consensus disorder prediction 103 168 - -
Pumo5g02719 522 Gene3D - 185 400 IPR037151 -
Pumo5g02719 522 MobiDBLite consensus disorder prediction 103 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02719 Pumo-Chr5 73767773 73776389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02719 K10767 - gmx:100776159 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02719 5 73767773 73776389 Pumo5g02719 5 73767773 73776389 ECH
Pumo5g02719 5 73767773 73776389 Pumo3g02308 3 35231276 35236939 PCT