Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02308 ATGGCGGCTGGCCCAACAAAAACCTCACCCTCACCCTCCGATCGACCCACCATGGTCCCTCCCCCAATGCTCGTCTCCGACTCCTTCGCCAAGGACGCCATCCTCGCCTGGTTCCGCGGCGAGTTCGCCGCAGCCAACGCCATCATCGACGCCCTCTGCGCCCACCTAGCCGCCGCCTCCGCCTCCGCCCACGACTACGACGCCGTCTTTGCCGCCATCCACCGCCGCAGGCTCAACTGGATCCCCGTCCTCCAGATGCAGAAGTACCACACCATCGCCGACGTCACGCTCGAGCTCCGCAGACTCGCCGACACAAACCACAACGCCGACGCCGAACACAAAACCGACGAGAAAACGACGTCGTCGGAGAGTGTCGGAAATGGTGGTGGCGGTGATGAACACGATGAGAACGAGTCCCAGTCCCCCGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCAGGCTAGTCCCATGAACGTGAATATATGTTCCAATCATGAAGAGTGCGAAGGACGTTCTTCACAGTTTAAATTGACAAAAGGTTTCACAGCAAAAGAATCAGTGAAGGGACATATGGTGAATGTAGTAAAAGGATTGAAGTTATATGAGGACATTTTCACTGATTCAGAACTGTGCAAGCTGACAGATTTTGTGAATGAGATCCATGCTGCTGGCCAGAATGGGGAACTGTCAGGTGAAACTTTTATATTATTCAACAAGCAGATGAAAGGGAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGAGGACGCAAAAAGCAATATAGAGCCAATTCCAACACTTCTCCAAGGTGTCATTGATCACCTTATTCAGTGGCAATTACTTCCCGAGTACAAAAGACCAAATGGTTGTATCATCAACTATTTTGAAGAGGGGGAGTTTTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTGTGTCCACTCTTCTTCTCTCTGAATCAACTATGGCTTTTGGGCGTATACTTACTAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTTTGGTGATGAGAGGAAACAGCGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTCAGCATTACCTTCTTCAGAGTGAGGCCAGACTCCAACCAATGCCAATCACCAACTCCTACCATGACAAGTGCGATGACTCTGTGGCAACCTGGCATTGCTGCTAGTCCATATGCTTTGCCAAATGGTGCTCTAACTAGCTATGAGGGTATGGACATGATGCCCAAATGGGGAATGCTTCGTGGTCCAATGGTGATGCTAACTCCTATGCGTCCTGTGGCACTGAGCCCTCGCAAACTTGCTGGTGGTGGGACTGGGGTGTTTTTGCCCTGGAATGTGCCATCTAGAAAACCTGCTAAGCATCTTCCCCCACGTGCACAAAAAGGAAGGCTTCTCACATTACCTTCCCCTGTTGAACCACAAATGGGAGAGTCCACTTCTGAACCAAGCATTTGTGTTGAAGGATAA 1551 0.5035 MAAGPTKTSPSPSDRPTMVPPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCAHLAAASASAHDYDAVFAAIHRRRLNWIPVLQMQKYHTIADVTLELRRLADTNHNADAEHKTDEKTTSSESVGNGGGGDEHDENESQSPESEITDSGSQEMQASPMNVNICSNHEECEGRSSQFKLTKGFTAKESVKGHMVNVVKGLKLYEDIFTDSELCKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPTLLQGVIDHLIQWQLLPEYKRPNGCIINYFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILTSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTSAMTLWQPGIAASPYALPNGALTSYEGMDMMPKWGMLRGPMVMLTPMRPVALSPRKLAGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLTLPSPVEPQMGESTSEPSICVEG 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02308 516 MobiDBLite consensus disorder prediction 476 516 - -
Pumo3g02308 516 Gene3D - 183 398 IPR037151 -
Pumo3g02308 516 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 30 141 IPR044842 GO:0003729|GO:0006402|GO:0032451
Pumo3g02308 516 MobiDBLite consensus disorder prediction 1 20 - -
Pumo3g02308 516 SUPERFAMILY Clavaminate synthase-like 191 390 - -
Pumo3g02308 516 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 294 391 IPR005123 -
Pumo3g02308 516 MobiDBLite consensus disorder prediction 108 155 - -
Pumo3g02308 516 Pfam 2OG-Fe(II) oxygenase superfamily 298 388 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02308 Pumo-Chr3 35231276 35236939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02308 K10767 - gmx:100791586 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02308 3 35231276 35236939 Pumo3g02308 3 35231276 35236939 ECH
Pumo5g02719 5 73767773 73776389 Pumo3g02308 3 35231276 35236939 PCT