Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02718 ATGAATTTCTTCACATCGGTTTTCTCCGACGACCCGGACCCTTCCGACTCCTACAATGCGCACCGAAACGAATCGCAAGGCGCTTCCGAGCGCCGATCCGATTCCTCCTCCGGCGGCGGCGCGTGGGAATTATGGAAAACCCTGAGCGCGAAATCGGAATCCATCATCGAGACCTACCGTCGCGACCTGCAGGAATTCAGCACCGGTTTGAAGAAGGAGATTGAGGTCGCTCACGGTTCCCTCGAGTCGGTGGGCCACGTCATCGACCACTTCGGAAACACCGTCGTCAAAGGCACCGCTCAATTCATATCTCACGGCAAAGACACCATCCTCATCGATTCCGATTCCGATTCCAATAATATCAAAAACAAGCGCCTTAATTCGAAACGCTATAGTAGGTTTGACGCTCAGGTTCGTGCAATTCAGGGTTACGTTAGCACTTACACCGAAGTGCCCGAGGATTTGGATGAGTATGAGAAGTGGAAATCGGGGTTTGAGTTGGAGGGGAAGAGGGACGAAATGGAAGGGTTACTAAAAGAGAATGAGGCTATGGAGAGTGTTTACAAGAGGGTTGTTCCCAGTGTTGTTGACCGTGACACGTTCTGGTGTAGGTATTATTATAGAGTTTATAGGTTCGAGAAAGCTGAGGATGTGAGGGCGAGGCTCGTGAGGAGAATGTCGAGGGACGAGGAGGAGTTGAGTTGGGATATTGAAGAAGAAGAAGATGTGAGTGGTGATGAGAATAAGGGGAAAGAGGGGAGTTCTGAGTTGCATGGAACAAAGAGGTTGAATGTGGAAGAGATGAAAAAGTCTGCTGAGGAAGAAAAGAGAGGTGATTTATTGCAAAGCGAGAAGGATGAGTCTGTTGAAGAATCAAAGGTTGAGAAGATGGGTGATGGAAGTAAGAAAAGTTTCAGTGAAGAGGATAATGGGAATGGTTCTGATAAGAAAGTGATAATGGAAAGGGAGGTTGAAAATGAGAAGGAGGATCTTGAGTGGGATGAGATTGAGGATCTTAGTAGAATTGATGAAGAGAAGGCAACTCGGACAGGTAGCCATACCAAAGTTGATTTGCGGAAACGCCTCAGTGCTGCTCAAGAGCAAGAAGAAGAAGAAGAAGACTTGAGTTGGGACATTGAAGATGATGATGAGCATGCTAAGGCATGA 1167 0.4756 MNFFTSVFSDDPDPSDSYNAHRNESQGASERRSDSSSGGGAWELWKTLSAKSESIIETYRRDLQEFSTGLKKEIEVAHGSLESVGHVIDHFGNTVVKGTAQFISHGKDTILIDSDSDSNNIKNKRLNSKRYSRFDAQVRAIQGYVSTYTEVPEDLDEYEKWKSGFELEGKRDEMEGLLKENEAMESVYKRVVPSVVDRDTFWCRYYYRVYRFEKAEDVRARLVRRMSRDEEELSWDIEEEEDVSGDENKGKEGSSELHGTKRLNVEEMKKSAEEEKRGDLLQSEKDESVEESKVEKMGDGSKKSFSEEDNGNGSDKKVIMEREVENEKEDLEWDEIEDLSRIDEEKATRTGSHTKVDLRKRLSAAQEQEEEEEDLSWDIEDDDEHAKA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02718 388 MobiDBLite consensus disorder prediction 340 367 - -
Pumo5g02718 388 MobiDBLite consensus disorder prediction 231 388 - -
Pumo5g02718 388 Coils Coil 355 375 - -
Pumo5g02718 388 MobiDBLite consensus disorder prediction 244 326 - -
Pumo5g02718 388 MobiDBLite consensus disorder prediction 1 39 - -
Pumo5g02718 388 Coils Coil 167 187 - -
Pumo5g02718 388 PANTHER SYNAPSE-ASSOCIATED PROTEIN 11 378 - -
Pumo5g02718 388 Pfam BSD domain 161 217 IPR005607 -
Pumo5g02718 388 Gene3D BSD domain 124 223 IPR035925 -
Pumo5g02718 388 Coils Coil 212 232 - -
Pumo5g02718 388 SUPERFAMILY BSD domain-like 131 218 IPR035925 -
Pumo5g02718 388 SMART wurzfinal6 161 213 IPR005607 -
Pumo5g02718 388 ProSiteProfiles BSD domain profile. 161 213 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02718 Pumo-Chr5 73765442 73766795 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02718 - - gmx:102665065 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02718 5 73765442 73766795 Pumo5g02718 5 73765442 73766795 ECH
Pumo5g02718 5 73765442 73766795 Pumo3g02307 3 35228650 35230589 PCT