Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02307 ATGAATCTCTTCAAATCCGTTTTCTCAGACGACCCGGACCCTCCTCGACCCGAATCCAGATCCACCAATGCGCCGTCAGACAAAGCCCCGGATCTCGATTCCCCGCCCCGGTCGAGCGCCACCGATTCCGGCGGCGGCGGCGGCGACGGTTGGAACTTCGGCGGCCTCTTCAAAACCCTGACATCGAAATCGGAATCCATTATCGAGACCTACCGTCGCGATCTGCAGGAATTCGGCACCGGCTTGCGGAAAGAGATAGAGGTCGCGCAGGGCTCCCTCGGGACCGTGGGCCACGTCATCGACGAGTTCGGAAACACCGTCGTCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGACTCCATCCTCGCCGTCGATCTCGATTCCGATTCCGATAATAATAATAGCGCCAGTAGGAAGAGCTTGGATTCGATGCGGTACAGTAGGTTCGACGCTCAGGTTCGTGCCATTCAGGGTGACGTTAGCACTTACTCCGAGGAGCCCGAGGATTTGGACGAGTTCAGTGAGTGGAAATTAGGGTTTTCGTTGGAGGGGAAGGGTGAGGAAATGGAGGGGCTTTTCAGAGAGAATGATGCTATGGAGAGTGCTTACAAAAGGGTTGTTCCAGATACTGTTGATAACGAAACTTTCTGGTATAGGTATTATTATAAGGTTTATAAGCTCAGGAAAGCTGAAGATGTTAGGACTAGGCTTGTGAGTGGAATATCTGGGGAAGATGAGGATTTGAGTTGGGATGTTGAAGATGAAGATGATGATGATGGGAATAGAGGTGAAGCTAAACCTGTGGTTATGAATAAAGAGGTTGTCGGTGGTGAAAATTTGGATAACACCCAGTTACATGTTGGTGGCAGTGAAGGGGGAACAAAGAGATTGGATGTGGAAGAGGAGTCTAAAGTAGAAAAGAAAGATAATTTATTACAAAGTGAGGAAGTTGGCAACAAGGTGGATAAGCCTGTTGAGGAGCCACAAGTTGAGAAATCTGAATCTATTGGTGAGACGGGTGGTGTTGATGAGGCGTCAAAGTCAAAAGTGGATGTTGCTGTGAGCAAGAATGATTCTGCAGCTGAAGCTAATGAGAATGAGATAAAGGAAAAGGAGGGTGGTGATGAGAAAACTTCCAGTAAAGGTAACGAGTCTTCAGTGGCTGAAATTCGGCAATCGCCAAATGAGGAGGAGGAGGAGGAGGAGGAGGACCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATTGATGAAAAGAAAACAACGCAGAGTGGTGGCACAAGCAAAGTTGATTTGCGGAAGCGGCTTAGTGCTGCGGAAGAAGAGGAAGACTTGAGTTGGGACATTGAAGATGATGATGAGCCTGCCAAGGCTTGA 1380 0.4884 MNLFKSVFSDDPDPPRPESRSTNAPSDKAPDLDSPPRSSATDSGGGGGDGWNFGGLFKTLTSKSESIIETYRRDLQEFGTGLRKEIEVAQGSLGTVGHVIDEFGNTVVKGTAQIISQGKDSILAVDLDSDSDNNNSASRKSLDSMRYSRFDAQVRAIQGDVSTYSEEPEDLDEFSEWKLGFSLEGKGEEMEGLFRENDAMESAYKRVVPDTVDNETFWYRYYYKVYKLRKAEDVRTRLVSGISGEDEDLSWDVEDEDDDDGNRGEAKPVVMNKEVVGGENLDNTQLHVGGSEGGTKRLDVEEESKVEKKDNLLQSEEVGNKVDKPVEEPQVEKSESIGETGGVDEASKSKVDVAVSKNDSAAEANENEIKEKEGGDEKTSSKGNESSVAEIRQSPNEEEEEEEEDLGWDDIEDLSSIDEKKTTQSGGTSKVDLRKRLSAAEEEEDLSWDIEDDDEPAKA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02307 459 Pfam BSD domain 177 233 IPR005607 -
Pumo3g02307 459 ProSiteProfiles BSD domain profile. 177 229 IPR005607 -
Pumo3g02307 459 MobiDBLite consensus disorder prediction 277 459 - -
Pumo3g02307 459 SUPERFAMILY BSD domain-like 146 234 IPR035925 -
Pumo3g02307 459 Gene3D BSD domain 138 240 IPR035925 -
Pumo3g02307 459 SMART wurzfinal6 177 229 IPR005607 -
Pumo3g02307 459 MobiDBLite consensus disorder prediction 363 380 - -
Pumo3g02307 459 MobiDBLite consensus disorder prediction 294 334 - -
Pumo3g02307 459 MobiDBLite consensus disorder prediction 1 50 - -
Pumo3g02307 459 PANTHER SYNAPSE-ASSOCIATED PROTEIN 13 409 - -
Pumo3g02307 459 MobiDBLite consensus disorder prediction 395 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02307 Pumo-Chr3 35228650 35230589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02307 - - gmx:100792113 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02307 3 35228650 35230589 Pumo3g02307 3 35228650 35230589 ECH
Pumo5g02718 5 73765442 73766795 Pumo3g02307 3 35228650 35230589 PCT